Polypterus senegalus (gray bichir): 120542138
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Entry
120542138 CDS
T08668
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04010
MAPK signaling pathway
psex04020
Calcium signaling pathway
psex04510
Focal adhesion
psex04540
Gap junction
psex04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120542138 (pdgfrb)
04020 Calcium signaling pathway
120542138 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120542138 (pdgfrb)
04540 Gap junction
120542138 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120542138 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psex01001
]
120542138 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
psex04090
]
120542138 (pdgfrb)
Enzymes [BR:
psex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120542138 (pdgfrb)
Protein kinases [BR:
psex01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
120542138 (pdgfrb)
CD molecules [BR:
psex04090
]
Proteins
120542138 (pdgfrb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
VEGFR1-3_N_Ig-like
C2-set_2
VEGFR-1-like_Ig-like
C2-set
RIFIN
Ig_VEGFR-1-like_5th
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
120542138
NCBI-ProteinID:
XP_039630251
LinkDB
All DBs
Position
13:complement(20911617..21058489)
Genome browser
AA seq
1073 aa
AA seq
DB search
MKMEGKIFCLTIFFLVCFQTCSATTGPTISPEDPRIIVELHSTFMLSCSGSEDILWKHKD
GLIVTPVEIINGVYRSNLTLHNVLGVHTGLYTCHYKTSEAKASSTYIFVPDPQMWFLPLD
YKNSVVMKTAAEATIPCLVTNPETVVTLYEKKSMQPVEGVYQPTEGFTGIVEDKAYFCKA
TMKDEDQDSDLFYVYSIEVPEVFRAFINASKQVVKQGEPLVVNCTTHGSELALFNWDYPR
KAFNKTIEPVTDVTAGAEWNLRSILNITSVTLQDSGTYVCRVSQGVHEEEAEDQINITVI
ENGFVRLTSELPANLSAKLHESFILQVVIEAYPVPEIKWLKDNMTLVDNMNEVSIETEAS
EETRYSTTLTLVRINSEQNGIYTVQVSNEYDDQELSFHLQVNVPPHMLELSDHHPTEEGH
AVVCAAEGMPAPEIEWYTCNKKTKCSFKDISWSPLSTYPENISSQTNVSFNESRRVFVSR
SVVVFKKVQSLLSVRCIARNELGTKLQDVRLVSNSLNSQVAVISAILALLVIALVALIVL
IILWRKKPRYEIRWKVIESVSSDGHEYIYVDPMHLPYDPSWEFPRDSLVLGRTLGSGAFG
RVVEATAYGLSHSQSATKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACT
KRGPIYLITEFCRYGDLVDYLHRNKHTFLQYYADKSRRDTEMYSNTSTNGQGKSYVTLTS
ESDGGYMDMSKDDSTEYVAMQSDSIKYADIEPAVYETPYQRDSYQGQAPESVNNSLVINE
SPVLSFTDLVGFSYQVAKGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHD
SNYISKGSTFLPLKWMAPESIFHNLYTTQSDVWSYGILLWEIFTLGGTPYPNLPMNELFY
TALKRGYRMCKPTHATDEIYEIMQKCWDEKFEKRPEFASLVHSVGKMLAESYKKKYDQVD
EEFFKSDHPAVVRTKPRILGRDNLRPTSSSSERPDSALSPDNEYIIPIPDPKPEEAEVKV
PETETNTDIQENENYSTVVAVIPEECQVTPQELGQISDTEQIKNEPEVEDSFL
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggaaggaaaaatattctgtctcaccatcttctttttagtctgtttccagacc
tgctctgccaccactgggccgacaatctcacctgaggaccctcggattattgtggaatta
cactccacctttatgcttagctgctcaggttctgaggatatcctttggaagcacaaagat
gggcttattgtcactccagttgagatcataaatggagtatacaggagtaacctcacactg
cacaatgtgctcggggtacacacaggcctgtacacgtgccattacaagacatcagaggcc
aaagcatcaagtacttacatcttcgttccagatccacagatgtggttccttccattggat
tacaagaattcagtagtgatgaagacagcagctgaagccaccatcccgtgtcttgttacg
aaccccgagactgtagtcactctttacgaaaagaaaagtatgcaaccggtagagggagta
taccaaccaacagaaggcttcactgggattgtggaggacaaagcttatttctgcaaagcc
accatgaaagatgaagatcaagactcagatctgttctatgtgtacagcattgaagtacct
gaggtgtttcgagctttcattaatgcctccaagcaagtagtgaagcaaggagaacctctc
gtcgttaactgcacgacacatggatcagagctggcgttattcaactgggactatccaagg
aaagcgtttaacaaaaccatcgagcctgtaacagatgtgacggcgggagcagagtggaac
ctgcgctcgatactcaacataacaagcgtcactttacaggattcaggcacctacgtctgt
agagtcagtcaaggcgtacatgaggaagaggcagaggaccaaatcaacatcactgtgatc
gaaaatggctttgtgagactgacttctgaactgcccgcaaacctctctgccaagctgcat
gagagcttcattcttcaggtggtgatagaggcctatccagtaccggaaatcaagtggctg
aaagacaacatgacccttgttgacaacatgaatgaagtgtcaatagagacagaggcatct
gaagagacgagatattcaaccacgttgactctggtgcggattaactctgaacagaatggc
atttacaccgtccaggtctcaaatgagtatgatgaccaagagctcagctttcaccttcag
gtcaatgtgcctccacatatgctggaactttcagaccaccatccaactgaggagggccac
gctgtagtctgtgctgcagaagggatgccagcaccagaaattgagtggtacacctgcaat
aagaaaaccaaatgcagctttaaggacatttcatggagtccactatccacttatcctgag
aatatcagcagccaaaccaatgtcagctttaatgaaagccgcagagtgtttgtgtcaagg
agtgttgttgttttcaaaaaagtgcagagcttgctgtcagtccgctgcattgccaggaat
gagcttggcaccaaacttcaggatgtcagactggtctccaactctttgaactcccaggtc
gctgtcatatctgccatcctggctctcttggtgattgctctcgtggcccttattgttctc
ataatactgtggagaaagaaacctcgttatgagattcgctggaaggtgattgagtcggtg
agctccgatggtcatgaatatatttatgtggatccaatgcacttgccctatgatcccagc
tgggaatttccaagagacagcctggttttaggtcgaactctgggttctggagcctttggg
agggttgtggaagccaccgcttatggcctgagccactcacagtctgcaactaaagtcgca
gtgaaaatgctgaaatccactgcaagaagaagtgagactcaggctctcatgtcagagctg
aagataatgagtcaccttgggcctcacctcaatattgtcaaccttctgggagcctgcact
aagagaggccccatctatctcatcacggagttttgccgctatggagacctggtagactac
ctgcacaggaacaagcacactttcctacagtattacgctgacaagtcaagacgggacact
gagatgtacagcaataccagtacaaatggccagggaaagagctacgtaacactgactagt
gaaagcgatggaggatacatggacatgagtaaggatgactccacagagtatgtggcaatg
cagtcagacagcattaaatatgcagacattgagccagctgtttatgaaaccccctaccag
agggacagttaccaaggacaagctccagaaagcgtcaacaactcacttgtgattaatgag
tccccggttctcagctttacagacttggtgggatttagctatcaagtagccaaagggatg
gacttcctggcttctaaaaattgtgtgcatcgggatctggcggccagaaatgttttaatc
tgtgaagggaaactggtgaaaatatgtgattttggacttgcacgggacatcatgcacgac
tccaactacatctcgaagggcagtaccttcctgcctttgaagtggatggcccccgagagc
atcttccacaacctgtacaccacacagagtgatgtctggtcatatggcatcttactatgg
gagatctttactcttggtgggaccccttatcctaatcttccaatgaacgagttgttttac
actgccctcaagagaggctacagaatgtgcaaacccacccacgcaacagatgaaatctat
gaaattatgcaaaagtgctgggatgaaaagtttgagaaaagaccagaatttgcaagcctg
gttcactctgttgggaagatgttagccgagtcttataagaagaaatatgaccaagtggat
gaagaattctttaaaagtgatcaccccgcagtggtccgaacaaagccaaggattttgggg
agagataacttaagaccaacttcctcttcctcagaaagacctgattcagccctgagccca
gataatgaatatatcatcccgataccagatccaaagccagaggaggctgaagtgaaagta
ccagaaacagagacaaatacagacatacaagaaaatgagaattacagtacggttgttgca
gtgatcccagaggaatgccaggtcacaccacaggaactgggacagatttcagatactgag
cagattaaaaatgagccagaagtggaagacagctttctgtag
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