KEGG   Polypterus senegalus (gray bichir): 120542490
Entry
120542490         CDS       T08668                                 
Name
(RefSeq) actin, cytoplasmic 2
  KO
K05692  actin beta/gamma 1
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03082  ATP-dependent chromatin remodeling
psex04145  Phagosome
psex04210  Apoptosis
psex04510  Focal adhesion
psex04520  Adherens junction
psex04530  Tight junction
psex04810  Regulation of actin cytoskeleton
psex04814  Motor proteins
psex04820  Cytoskeleton in muscle cells
psex05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120542490
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120542490
  09143 Cell growth and death
   04210 Apoptosis
    120542490
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120542490
   04520 Adherens junction
    120542490
   04530 Tight junction
    120542490
  09142 Cell motility
   04814 Motor proteins
    120542490
   04820 Cytoskeleton in muscle cells
    120542490
   04810 Regulation of actin cytoskeleton
    120542490
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120542490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psex03021]
    120542490
   03019 Messenger RNA biogenesis [BR:psex03019]
    120542490
   03036 Chromosome and associated proteins [BR:psex03036]
    120542490
   03029 Mitochondrial biogenesis [BR:psex03029]
    120542490
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:psex04812]
    120542490
   04147 Exosome [BR:psex04147]
    120542490
Transcription machinery [BR:psex03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     120542490
Messenger RNA biogenesis [BR:psex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     120542490
Chromosome and associated proteins [BR:psex03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     120542490
    NuA4 complex
     120542490
  Chromatin remodeling factors
   BAF complex
    120542490
   PBAF complex
    120542490
   GBAF(ncBAF) complex
    120542490
   SWR1 complex
    120542490
Mitochondrial biogenesis [BR:psex03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    120542490
Cytoskeleton proteins [BR:psex04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     120542490
Exosome [BR:psex04147]
 Exosomal proteins
  Proteins found in most exosomes
   120542490
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 120542490
NCBI-ProteinID: XP_039630932
LinkDB
Position
13:complement(142189220..142192889)
AA seq 375 aa
MDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGLESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggatgaagaaattgccgcacttgttgttgacaacggatccggtatgtgcaaagctgga
ttcgctggagatgatgctccccgagctgtcttcccatccattgtcggtcgcccaagacac
cagggtgtgatggttggtatgggtcagaaagacagctacgttggtgacgaggctcagagc
aaaagaggcattctgaccctgaagtaccccattgaacatggcattgttaccaactgggat
gacatggagaaaatctggcatcacacattctacaatgaacttcgtgtcgcccctgaggaa
cacccagtgttgctcacagaggctcccctgaaccccaaagccaacagagaaaagatgacc
cagatcatgttcgagaccttcaacaccccagccatgtatgttgccattcaggctgtgctg
tcactgtatgcctccggtcgtaccactggtattgtgatggactctggtgatggtgtcacc
cacactgtgcccatctatgaaggttatgccctgcctcatgccattctccgtctggatttg
gctggtcgtgacctgacagactacctcatgaagatcctgaccgagaggggctacagcttc
acaaccacagctgaaagagaaattgtcagagacatcaaggagaagctgtgctatgttgcc
cttgactttgaacaggagatggccactgctgcatcctcctcctccttggaaaagagctat
gagctgcctgatggacaggtcatcaccattggaaatgagcggttcagatgcccagaggca
ctcttccagccatcattcttgggtctggaatcttgtggtatccatgagaccaccttcaat
tcaatcatgaagtgtgatgttgacatccgtaaggatctgtatgccaacactgtgctgtct
ggtggtaccaccatgtaccctggcattgcagacagaatgcagaaggagattacagccctg
gcacctagcacaatgaaaattaagatcattgctccacctgagcgtaaatattcagtctgg
attggaggctctattctggcctccctgtccaccttccaacaaatgtggattagcaagcag
gagtatgatgagtctggaccatccattgtccaccgcaaatgcttctaa

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