Polypterus senegalus (gray bichir): 120542490
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Entry
120542490 CDS
T08668
Name
(RefSeq) actin, cytoplasmic 2
KO
K05692
actin beta/gamma 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03082
ATP-dependent chromatin remodeling
psex04145
Phagosome
psex04210
Apoptosis
psex04510
Focal adhesion
psex04520
Adherens junction
psex04530
Tight junction
psex04810
Regulation of actin cytoskeleton
psex04814
Motor proteins
psex04820
Cytoskeleton in muscle cells
psex05100
Bacterial invasion of epithelial cells
psex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120542490
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120542490
09143 Cell growth and death
04210 Apoptosis
120542490
09144 Cellular community - eukaryotes
04510 Focal adhesion
120542490
04520 Adherens junction
120542490
04530 Tight junction
120542490
09142 Cell motility
04814 Motor proteins
120542490
04820 Cytoskeleton in muscle cells
120542490
04810 Regulation of actin cytoskeleton
120542490
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120542490
05100 Bacterial invasion of epithelial cells
120542490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120542490
03019 Messenger RNA biogenesis [BR:
psex03019
]
120542490
03036 Chromosome and associated proteins [BR:
psex03036
]
120542490
03029 Mitochondrial biogenesis [BR:
psex03029
]
120542490
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120542490
04147 Exosome [BR:
psex04147
]
120542490
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120542490
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
120542490
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
120542490
NuA4 complex
120542490
Chromatin remodeling factors
BAF complex
120542490
PBAF complex
120542490
GBAF(ncBAF) complex
120542490
SWR1 complex
120542490
Mitochondrial biogenesis [BR:
psex03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
120542490
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
120542490
Exosome [BR:
psex04147
]
Exosomal proteins
Proteins found in most exosomes
120542490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
120542490
NCBI-ProteinID:
XP_039630932
LinkDB
All DBs
Position
13:complement(142189220..142192889)
Genome browser
AA seq
375 aa
AA seq
DB search
MDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGLESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaattgccgcacttgttgttgacaacggatccggtatgtgcaaagctgga
ttcgctggagatgatgctccccgagctgtcttcccatccattgtcggtcgcccaagacac
cagggtgtgatggttggtatgggtcagaaagacagctacgttggtgacgaggctcagagc
aaaagaggcattctgaccctgaagtaccccattgaacatggcattgttaccaactgggat
gacatggagaaaatctggcatcacacattctacaatgaacttcgtgtcgcccctgaggaa
cacccagtgttgctcacagaggctcccctgaaccccaaagccaacagagaaaagatgacc
cagatcatgttcgagaccttcaacaccccagccatgtatgttgccattcaggctgtgctg
tcactgtatgcctccggtcgtaccactggtattgtgatggactctggtgatggtgtcacc
cacactgtgcccatctatgaaggttatgccctgcctcatgccattctccgtctggatttg
gctggtcgtgacctgacagactacctcatgaagatcctgaccgagaggggctacagcttc
acaaccacagctgaaagagaaattgtcagagacatcaaggagaagctgtgctatgttgcc
cttgactttgaacaggagatggccactgctgcatcctcctcctccttggaaaagagctat
gagctgcctgatggacaggtcatcaccattggaaatgagcggttcagatgcccagaggca
ctcttccagccatcattcttgggtctggaatcttgtggtatccatgagaccaccttcaat
tcaatcatgaagtgtgatgttgacatccgtaaggatctgtatgccaacactgtgctgtct
ggtggtaccaccatgtaccctggcattgcagacagaatgcagaaggagattacagccctg
gcacctagcacaatgaaaattaagatcattgctccacctgagcgtaaatattcagtctgg
attggaggctctattctggcctccctgtccaccttccaacaaatgtggattagcaagcag
gagtatgatgagtctggaccatccattgtccaccgcaaatgcttctaa
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integrated database retrieval system