KEGG   Polypterus senegalus (gray bichir): 120542797
Entry
120542797         CDS       T08668                                 
Symbol
rapgef6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
  KO
K08020  Rap guanine nucleotide exchange factor 6
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex04517  IgSF CAM signaling
psex04530  Tight junction
Brite
KEGG Orthology (KO) [BR:psex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    120542797 (rapgef6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    120542797 (rapgef6)
SSDB
Motif
Pfam: RasGEF RasGEF_N RA PDZ PDZ_6 cNMP_binding RA_2 PDZ_2 AAA_lid_NAV1
Other DBs
NCBI-GeneID: 120542797
NCBI-ProteinID: XP_039631387
LinkDB
Position
13:complement(42095958..42469918)
AA seq 1658 aa
MTSVMDVLFKRALKKLPHERTSEDLNIIYSHFHGMDILSHLREHQLRSMCTVARYERHEA
NHVLFYPDSLSTCWYILLSGSVFMKESMFLPRCCFGKQSGGRRGCECITLEPSEMIVVEN
VNPAEGTLLQREAPHRQSRRHFAKLHSRGDRQNITDNVESSGYLPLPADLTKMHLTDSPH
SQMTHVSASQSGCSIASDSGSSSLSDIYQATESEVGDVDLSGLPEAVVDSEEEEEEDEDI
ERASDTLLGRDVVRDCLDKLPIDRTEDDVEQLLEFMHQLPAFANMTMSVRRELCSVMVSE
VVEQAGAVILQDGQELDSWYVILNGAIEITHLDGRAETLCMGNSFGISPSLDKQYMNGVV
RTKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVKEHRELDRSGTRKGHIVIKG
TPERLILHLVEEHSVVDSTYIEDFLLTYRTFISCPMEVGKKLLEWFIDEDLRDKVTRIVL
LWVNNHFNDFEGDPLMTQFLEEFENNLETTKMKGHLRLLNIACAAKAKWRQTTLLKSSRE
SPLHFSLLGGSERGFGIFIEAVDPGSKAAEAGLKRGDQIMEINGQNFENISYSKAIEILR
NNTHLSIAVKTNIFVFKELLSRITSEKNNGGAHIPKIQEKKGNRYSIPDLPVDMEQMFPT
EKGNKKIKANTVSGGRNKIRKILDKTRFSILPPKPFSDGGVSQSQDDSVVGTRQCRHSVA
IMPIPGTLSSSSPDLLQPTASVLDFSNPAVVGFYYIPDQVIRVFKVDQQSCYIIISKDTT
AKDVVAHAVNEFGLTAAPDTYSLCEVSISPEGVIKQRRLPDQLSKLADRIQLNGRYYLKN
NMETETLCSDDDAQELLRESQISLLQLSTVEVATQLSMRDFELFRNIEPTEYVDDLFRLD
SKQGCANLKQFEEVINQETFWVATEILRESNQIKRMKIIKHFIKIALHCQECKNFNSMFA
IISGLNLAPVTRLKGTWEKLPNKYEKLFDDLQEIFDPSRNMAKYRNVLTNQSMQPPIIPL
FPVVKKDLTFLHEGNDSSVEGLVNFEKLRMIAKEIRHVIRMTSANMDPAVMFRQRKKRWK
SLGSLSQGSTNSNMLDVQGGAHKKRVRRSSLLNAKKLYEDAQMARKVKQYLSNLNVETDE
EKFQIMSLQCEPAYSTLSKNLSERRSAKSDMSPVSMRSGIASGKSHQQHRMSQVLQVPAV
NLYPFRNKSTAKDTASTSTSSPQCIKKPLNLSDDIPYKKAPEDSISNTSSLHSSPPGSPQ
GSPRKVGNIPRSQNSSQVNLSGSSSSLTSENSTKNSGVRSGTIGHALLSSAKSENFSDLS
QSEISSRSSIVSNSSVDSISATTSEEHPLTQQPNHMELIRTGNSVPTTAECKQPCASHSI
QRPFIARCSTFASSASNEELAHEFISVDAADSGRGSWTSCSSNSHDNFQSLQCQRAWDLS
PFRNKHVDGPIAEVELTGQWADNSSVCSEDLSRTNRHSRGSLELNQSRQSWASSSSLSDT
YEGNYGTIKRRVTENPQSAQEDPSDSKPATDPSYKTVTSSTDKGLIVYCVTSPQKDSRYR
GPPPTPPGYLGIPLVDVKEGSSRKQLHLKPPDYNVAVHRSKMVSPYGTIDCQPEAGIQSK
MLVQSQTHNWHSHDSKLANVSLQGAQDSHEDEEQVSAV
NT seq 4977 nt   +upstreamnt  +downstreamnt
atgacatctgtcatggacgtcttgtttaaacgagctctaaagaagctaccgcatgagagg
acttcagaggatttaaatattatttattctcactttcatggtatggacatactgtctcat
ctcagggaacatcagctaagatcaatgtgcactgtagctcgttatgagaggcacgaagcc
aatcatgttctgttttaccctgacagcctttctacttgttggtatattcttctgtcagga
tctgtcttcatgaaggaatcaatgttcttgcccagatgttgttttggtaagcagtctggc
ggaaggagaggatgtgaatgtatcactttagagccatcagagatgattgtggtggaaaat
gtcaatccagctgagggaactctgttacagcgggaagcacctcatcgtcaatcccgccga
cacttcgccaaactccattcccggggagacagacaaaatataactgacaatgtggaatct
tctggctacctcccgctaccagcggatctcaccaagatgcacctgactgatagtcctcat
tcacagatgactcatgtgtctgccagccaatcaggatgcagtattgccagcgactctgga
agcagcagcttatctgatatttatcaggcaacagagagtgaagtgggggatgtggatttg
tcaggacttcctgaggcagttgttgactccgaagaggaagaagaggaagatgaagacatt
gaaagggcctctgatacattattgggcagagatgtagtgcgagattgtcttgacaagctg
ccaattgacagaactgaggatgatgttgaacaattactggaattcatgcatcaactgcca
gccttcgcaaacatgaccatgtctgtcagaagagagctgtgttctgttatggtatctgaa
gttgtggaacaagcaggagctgtaattcttcaagatggacaagaattggattcctggtat
gttattttaaatggtgcaattgaaattacccatctggatggaagggctgaaacactttgt
atgggaaacagctttgggatttctccatctctggataagcagtatatgaatggggttgtc
cggacaaaagtagacgactgccagtttgtttgtatagctcagcaagattactggcgtatt
ttgaaccatgtggagaagaatacacacaaagtggaggaagaaggtgaaattgtgatggtg
aaagaacacagagaactggaccgcagtggaacaagaaaaggacacattgtcattaaggga
actccagaacgtctcatcttgcacttagtggaagaacactctgttgtggactccacatat
attgaagattttctacttacatatagaactttcatctcatgccccatggaagttggaaaa
aaattgctggagtggttcattgatgaggatctcagggataaggtaacacgaattgtgttg
ttgtgggttaataatcactttaacgattttgaaggggatcctttaatgacccagttcctt
gaagagtttgagaataatctagaaacaacgaaaatgaaaggacacctcagacttttaaat
atagcatgtgcagcaaaggcaaagtggagacagaccacattgctaaagtcgtctagggag
tcccctttgcactttagcctccttggtggtagtgaaagaggatttggcattttcattgag
gctgtggacccaggaagtaaggcagctgaggctggtcttaaaagaggtgaccagataatg
gaaataaatggtcaaaattttgaaaatatttcttactctaaagctattgagatattgaga
aataacacacatctttccattgcggtgaaaacaaatatatttgtatttaaagagctactg
agcagaataacaagtgagaagaacaatggaggtgcacatatacccaaaatccaggaaaag
aaaggcaatcgctattccattccagatcttcctgtagatatggagcagatgtttcctact
gaaaagggaaataagaaaatcaaagcaaacacagtatctggaggaaggaataaaattaga
aaaatcttagataagacgcgttttagcatcttgccaccaaagccgttcagtgatggtgga
gtaagtcagtcccaggatgacagcgttgttggaacaaggcagtgcagacacagtgttgct
attatgcctattcctggcactttgtcctctagtagtccagatctcttacagcccacagcc
agtgtgttggacttctccaatcctgcagtggttggattttactatattccagaccaggtt
atcagagtctttaaagtggatcaacagagctgctacattattataagtaaggatactaca
gcaaaggatgtggtagcccatgcagtcaatgagtttggcctcactgcagcccctgacaca
tattccctctgtgaggtttctatcagtcctgaaggagtcattaagcaaagaaggcttcct
gaccaactgtcaaaactggcagatcgaatccagctcaatggcagatactatctgaaaaat
aacatggaaacagaaacactgtgttctgatgacgatgcacaggagcttctccgggaaagc
cagatttctctgttgcagctcagcactgtagaagtggcaacccagctgtccatgagagat
tttgagcttttccgaaacattgagccaacagagtacgtggatgacctcttcagattagac
tctaaacagggctgtgccaatctgaaacagtttgaagaggttattaatcaagaaaccttc
tgggtggccacagaaattttaagggagtctaatcagatcaagagaatgaagataattaaa
cacttcatcaaaattgccttacattgccaggaatgcaaaaatttcaactccatgtttgca
attataagtggtttaaatttggctccagttactcgtttaaagggaacctgggaaaagctc
ccaaacaaatatgaaaagctttttgatgacctgcaagaaatttttgacccctcaagaaac
atggccaagtaccgaaatgtgttgacaaaccagagtatgcaacccccaattattccattg
tttccggttgtgaaaaaagatctgacctttctacatgaaggtaatgattcaagtgtggaa
ggtttggtgaattttgaaaagttgcgtatgattgctaaagagattcgtcatgtcattcgg
atgacttctgccaacatggacccagcggtcatgttccgacagaggaagaagaggtggaag
agtttagggtctctcagtcaaggaagtacaaattcaaatatgcttgatgtacaaggagga
gctcacaagaaacgtgtcagacgtagctctcttctgaatgccaagaaattgtatgaggat
gctcagatggcacgaaaagtgaagcagtatctttcaaatctgaatgtagaaaccgatgag
gaaaaatttcagattatgtctctacaatgtgaacccgcttacagtaccttgtccaaaaat
ctgagtgaaagaagatcagcaaaatctgacatgtctccagtatcaatgaggtctggcatc
gcatctggaaaatctcatcagcaacaccgaatgagccaagtcctccaggtccctgcagtc
aatctgtacccctttaggaataaaagcacagcaaaggacactgcctcaaccagtacaagt
tctccccagtgcattaaaaaacctttaaatttatctgatgacataccttacaagaaagca
ccagaagattccatatccaacacttcttctttgcattctagccctcctggatccccacag
ggatctcctcgcaaagttgggaatatcccaagatcacaaaactctagccaggtgaatctg
tctggctcttcctcatctctgacaagtgaaaacagcactaagaacagtggagtgcgctcc
ggcacaataggtcatgccttgctgtcaagtgcaaaatcagaaaatttctctgatctgagt
caaagtgagatctcatcccggtccagcattgttagtaattcttctgtggattcgatatca
gccacaacttcagaagagcaccctttgactcagcaacctaatcatatggagcttattaga
acaggaaacagtgtgccaactacagctgaatgtaaacagccttgtgccagtcactccata
caaagacctttcattgctagatgctcaacatttgcctcctcagcaagcaatgaagagcta
gctcatgaatttatttcagtggatgcagcggatagtggccgtggaagttggacctcctgc
tccagtaactctcatgacaactttcagagtttacagtgccaacgggcctgggacctcagc
ccctttcgtaacaaacacgtagatggaccaattgcagaggtggagctaactggccaatgg
gcagacaatagcagtgtttgctcagaagacctttccagaactaatagacattccagaggt
agcttagagttgaaccagtccaggcaaagttgggcctcatcaagttccctttctgatacc
tatgaaggaaattatggaactataaaacgcagagttactgaaaatcctcaatcagctcag
gaggatccctcagactctaaaccagccacagacccatcttataaaacagttacttcaagc
acagacaaaggacttatagtgtactgtgtcacttcacctcagaaggacagtagatataga
ggcccaccacccacccctccaggatacctgggaatccctttagtggatgtaaaggaagga
tcttcccgcaagcagctgcatttaaaacctccagactataatgtggcagtgcacaggtca
aaaatggtgtctccctatggcaccattgattgccaaccagaagctggcattcagtcgaag
atgctagttcagtcccagacgcacaattggcacagccatgactctaaactagcaaatgtt
agtctacagggagcacaagatagtcatgaggatgaagagcaagtgtcagcagtttag

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