Pseudovibrio sp. FO-BEG1: PSE_0324
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Entry
PSE_0324 CDS
T01669
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
psf
Pseudovibrio sp. FO-BEG1
Pathway
psf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSE_0324 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psf03400
]
PSE_0324 (nth)
Enzymes [BR:
psf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PSE_0324 (nth)
DNA repair and recombination proteins [BR:
psf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSE_0324 (nth)
Prokaryotic type
PSE_0324 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEV34836
UniProt:
G8PJD0
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All DBs
Position
complement(315791..316510)
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AA seq
239 aa
AA seq
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MVDATKTKKVASSSSTRKKPISRSRYSKAEIYEIFATFEKDNPEPEGELNHSNEFTLLVA
VVLSAQATDAGVNKATKHLFQIADTPEKMVALGEDKIREEIRTIGLYKNKAKNTFLLSQM
LIEQHGGQVPQTREELEALPGVGRKTANVVLNIAFGQPTIAVDTHLFRIANRLGLAPGKT
PLDVEKKLEKVIPQDFMQHAHHWLILHGRYICKARKPACDRCIIYDLCKSKEKILKNAA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggttgacgccaccaaaacaaagaaggttgcatcttcttccagtacacgcaaaaagccg
atttcccgatcaaggtattctaaagccgagatttacgagatctttgcgaccttcgaaaaa
gacaacccggaaccggaaggagagctcaaccattccaatgagttcacactgttggtggcc
gttgtactgtcagctcaggcgactgatgctggcgtgaacaaggcgacgaagcatctgttc
cagattgcagatacgcctgagaagatggttgcacttggtgaggacaagatccgcgaagaa
atccggactattgggctttacaagaacaaggcgaaaaacacgttcctgctctcgcaaatg
ctgattgagcagcatggtgggcaggttcctcagacacgtgaagagctggaagcattaccg
ggcgttggccggaaaaccgcaaatgttgtgctgaatattgcttttgggcagccaacaatc
gcggttgatacacatcttttcagaattgcgaacaggctcggccttgcccccggcaaaaca
ccgctggatgtcgagaaaaaactcgagaaggtgataccgcaggacttcatgcagcatgcg
catcactggctcattttgcacggccgttacatctgtaaggcacgcaaaccggcttgtgac
cgctgcatcatctatgacctttgcaagagcaaagagaaaattttgaaaaatgctgcctga
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