Pseudovibrio sp. FO-BEG1: PSE_4094
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Entry
PSE_4094 CDS
T01669
Name
(GenBank) RNA polymerase-binding, DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
psf
Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psf03000
]
PSE_4094
03021 Transcription machinery [BR:
psf03021
]
PSE_4094
03009 Ribosome biogenesis [BR:
psf03009
]
PSE_4094
Transcription factors [BR:
psf03000
]
Prokaryotic type
Other transcription factors
Others
PSE_4094
Transcription machinery [BR:
psf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
PSE_4094
Ribosome biogenesis [BR:
psf03009
]
Prokaryotic type
rRNA transcription factors
PSE_4094
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
BssS
Motif
Other DBs
NCBI-ProteinID:
AEV38598
LinkDB
All DBs
Position
complement(4432795..4433211)
Genome browser
AA seq
138 aa
AA seq
DB search
MAVDVAIDYRPSPDEPFMNDQQREYFRRKLLAWKEDILKESKETLAALQEESTNHPDLAD
RASSETDRSIELRARDRQRKLISKIDAALARIEDGSYGYCEETGEPISVRRLDARPIATL
SIEAQEAHERREKIYRDD
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgatgtcgcaattgattatcgtccatctccggatgaaccattcatgaacgac
caacagcgcgagtactttcgtagaaagctgcttgcgtggaaggaagatattctgaaagag
agcaaggagacccttgctgcgcttcaagaagagagcacaaatcatccagatctggctgac
cgtgcttcttctgaaaccgatcggtcgattgagttacgtgcgcgcgaccggcagagaaag
ttgatttccaaaattgacgctgctcttgctcgcatcgaagacggatcctacggctattgt
gaagagactggcgagccaatctctgtacgccgactggatgcgcgacctatcgctacgctc
tctatcgaggcccaggaagcccacgagcgtcgcgagaaaatctatcgggatgactga
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integrated database retrieval system