KEGG   Pseudovibrio sp. FO-BEG1: PSE_4094
Entry
PSE_4094          CDS       T01669                                 
Name
(GenBank) RNA polymerase-binding, DksA
  KO
K06204  RNA polymerase-binding transcription factor
Organism
psf  Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:psf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psf03000]
    PSE_4094
   03021 Transcription machinery [BR:psf03021]
    PSE_4094
   03009 Ribosome biogenesis [BR:psf03009]
    PSE_4094
Transcription factors [BR:psf03000]
 Prokaryotic type
  Other transcription factors
   Others
    PSE_4094
Transcription machinery [BR:psf03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     PSE_4094
Ribosome biogenesis [BR:psf03009]
 Prokaryotic type
  rRNA transcription factors
   PSE_4094
SSDB
Motif
Pfam: DksA_N zf-dskA_traR BssS
Other DBs
NCBI-ProteinID: AEV38598
LinkDB
Position
complement(4432795..4433211)
AA seq 138 aa
MAVDVAIDYRPSPDEPFMNDQQREYFRRKLLAWKEDILKESKETLAALQEESTNHPDLAD
RASSETDRSIELRARDRQRKLISKIDAALARIEDGSYGYCEETGEPISVRRLDARPIATL
SIEAQEAHERREKIYRDD
NT seq 417 nt   +upstreamnt  +downstreamnt
atggcagttgatgtcgcaattgattatcgtccatctccggatgaaccattcatgaacgac
caacagcgcgagtactttcgtagaaagctgcttgcgtggaaggaagatattctgaaagag
agcaaggagacccttgctgcgcttcaagaagagagcacaaatcatccagatctggctgac
cgtgcttcttctgaaaccgatcggtcgattgagttacgtgcgcgcgaccggcagagaaag
ttgatttccaaaattgacgctgctcttgctcgcatcgaagacggatcctacggctattgt
gaagagactggcgagccaatctctgtacgccgactggatgcgcgacctatcgctacgctc
tctatcgaggcccaggaagcccacgagcgtcgcgagaaaatctatcgggatgactga

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