Stutzerimonas stutzeri RCH2: Psest_0318 Help Entry Psest_0318        CDS       T02391                                  Name (GenBank) NAD-dependent DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism psh  Stutzerimonas stutzeri RCH2 Pathway psh03030   DNA replication psh03410   Base excision repair psh03420   Nucleotide excision repair psh03430   Mismatch repair Brite KEGG Orthology (KO) [BR:psh00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Psest_0318    03410 Base excision repair     Psest_0318    03420 Nucleotide excision repair     Psest_0318    03430 Mismatch repair     Psest_0318  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:psh03032]     Psest_0318    03400 DNA repair and recombination proteins [BR:psh03400]     Psest_0318 Enzymes [BR:psh01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Psest_0318 DNA replication proteins [BR:psh03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Psest_0318 DNA repair and recombination proteins [BR:psh03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Psest_0318    NER (nucleotide excision repair)     GGR (global genome repair) factors      Psest_0318    MMR (mismatch excision repair)     DNA ligase      Psest_0318   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Psest_0318 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_OB DNA_ligase_aden HHH_5 RNA_ligase H2TH_5 Motif Other DBs NCBI-ProteinID:  AGA84929 UniProt:  L0GHZ1 LinkDB All DBs Position complement(340356..342020) Genome browser AA seq 554 aa AA seqDB search MQRLIALSLCLFSSVCLASCPTWNAARAQQEIISLQLQLQHWDDAYHRRGLALVDDEIYD QSRARLHDWQRCFPSTLAAPEPLAGAGGPVPHPVMQTGLVKLADEQAVADWIARREDLWI QPKVDGVAVTLVYRDGLLQQAISRGDGRSGQDWTANARRLPAIPSLLPEPSEVILQGELY WRLEQHVQATLGGAGARAKVAGAMAGRPLTAEAAQQIGLFVWDWPNGPEAMTVRLERLAA MGFTHSQRFSLPLAGLEQARHWRVQWYRQPLPFASDGVVLRQGRRPPAERWQAEPHWAAA WKYPLRTAVTEVRAVDFRIGRTGRITPLLRLTPVSLDDRQIRTLSLGSLERWRTLDVRPG DQVAVALAGHSIPQLDSVIWRSAERAAVEAPDPSQFHAHSCWQPRPGCEQQFIARLVWLS GKQGLHLPGTGAGSWQALLDAGLLPDLLAWLELDAAALQQAPGIGKVRAAKLAASFALAR QRPLTQWLKALGLPGGISLAPETSWDVLAARTVSQWQGEPGIGPARADQLHAFFRTAELQ ALRHRLRAVGISGF NT seq 1665 nt NT seq  +upstreamnt  +downstreamnt atgcaacgtctgatcgcgctatcgctgtgcctcttctcgtccgtttgcctcgccagctgt ccgacctggaacgctgcgcgagcgcaacaggaaatcatcagtctccaactgcagctgcag cactgggacgatgcctatcaccgccgcggcctggcgctggtggatgacgaaatctacgac cagagccgtgcgcgcctgcacgactggcagcgttgtttcccgagcaccctcgcggctccg gagccattggccggcgccggcggtccggtaccgcatccggtgatgcagaccgggctggtc aagctcgccgacgagcaggcggtcgcggactggatcgcgcgtcgcgaagatctttggatt caaccgaaggtggacggcgtggcggtcaccctggtctatcgcgacggcctgctgcaacag gctatcagccgtggcgacggccgcagcggccaggactggacggccaatgcccggcgactg ccggcgattccatccctgctaccggagccaagcgaggtgatcctccagggcgaactctac tggcgcctggagcagcatgtgcaggccacccttggcggtgccggcgcgcgcgcaaaggtc gccggcgcaatggccggcaggccgctgaccgccgaagccgcccagcagatcggcctgttc gtctgggactggccaaacggcccggaagcgatgaccgtgcgtctcgaacggctggcggcg atgggcttcacccacagccagcgtttcagcctgccgctcgcgggtctcgaacaagcgcgg cattggcgcgtacagtggtatcggcagcccctgccgttcgccagcgatggcgtggtgttg cgccagggccggcgaccgccggcagaacgctggcaggccgagccgcactgggccgccgcc tggaagtatcccctgcgtacagcggtgaccgaggttcgcgccgtggactttcgtatcggt cgtaccggtcgaatcacgccgctgctgcggctaactccggtaagcctggatgaccggcag atccgtacgctcagcctcggctcgctagagcgctggcgaaccctggatgtgcgccccggc gatcaggtcgcggttgcactcgccggacatagcatcccgcaattggattcggtgatctgg cgcagcgccgaacgcgcagcggtggaggcgccagacccgtcgcagtttcacgcgcacagc tgctggcagccgaggccgggctgtgagcagcaatttatcgcccgtctggtctggctgagc ggcaagcagggtcttcatcttcccggaacaggcgccggtagctggcaagcgctgctggac gccggcttgctgcccgacctgcttgcctggctggagctggatgccgcagcgctgcaacag gcgccaggcatcggcaaagtgcgcgcagccaagctcgccgcgagcttcgccctggcgcgc caacggccgctgacgcaatggctgaaggcactcggcctgcctggcggcatttcgctcgct ccggaaaccagctgggatgttctggccgcgcgtaccgtgtcgcaatggcagggcgaaccg ggtatcggaccggctcgcgcagaccagctgcatgccttcttccgcacagcggagctgcaa gcactgcggcaccgactgcgagcagtcggtatttccggcttctga

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