Plesiomonas shigelloides: SAMEA2665130_1115
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Entry
SAMEA2665130_1115 CDS
T04378
Symbol
patB
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00270
Cysteine and methionine metabolism
pshi00450
Selenocompound metabolism
pshi01100
Metabolic pathways
pshi01110
Biosynthesis of secondary metabolites
pshi01230
Biosynthesis of amino acids
Module
pshi_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SAMEA2665130_1115 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SAMEA2665130_1115 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pshi01007
]
SAMEA2665130_1115 (patB)
Enzymes [BR:
pshi01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
SAMEA2665130_1115 (patB)
Amino acid related enzymes [BR:
pshi01007
]
Aminotransferase (transaminase)
Class II
SAMEA2665130_1115 (patB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
SBT60646
LinkDB
All DBs
Position
1:complement(1260680..1261846)
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AA seq
388 aa
AA seq
DB search
MYATQEHTALFNFDEEIARANSDSEKWHKYANRDILPMWVADTDFRSPPAVIDALQARVA
HGVFGYGYGASPTLIDAFVARMQERYNWRIQPEWLVFLPGLVCGLNLAVRAYTQAGDRTI
APSPIYPPFAKSSAFAGIEQLAAPVTLQSGRWVLDLAAAKAQLQGNEKLLLLCNPQNPGG
TIYRREELLAQAEFAREHNLIICSDEIHCDLLLDAHPHIPIASLDADTEQRSITLMAPSK
TFNIAGLGASIAIIPNERLRREFVRTRAGIVPGVDILAYVAAEAAYTQGEPWLQAQLDYL
RANRDLVESQIAQIPGLQMAHTEATYLAWIDCSALPVENPHRFFEQAGVGLSPGTDFGND
RFVRLNFGCRRTLLREALDRMASAVQGL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaacacaggaacatacagcactgtttaatttcgatgaagagatcgcgcgcgcc
aatagcgacagcgaaaaatggcacaaatatgccaaccgcgatattttgccgatgtgggtc
gcggacaccgattttcgctcaccgccagccgtcattgacgcgctacaagcgcgcgtggcg
catggtgtgtttggttatggctatggcgcgtcaccgacgttgattgatgcctttgtggcg
cggatgcaagagcgctataactggcgcatccagccggaatggttggtctttttgccaggg
ctagtgtgtgggctgaatttggcggtgcgtgcctacacccaggccggagatcgcaccatt
gcaccaagccctatttatccgccttttgccaaatcctccgcttttgctggtattgagcag
ttagccgcaccggtgacgctacaaagtggacgttgggttctggatctggcggccgcaaaa
gcgcagctacagggcaatgaaaaactgctgctgctgtgcaatccgcaaaatccgggcggc
actatttatcgccgtgaagagttgctggcacaagccgagtttgcccgtgagcacaatctg
attatctgcagcgatgaaatccactgcgatctgctgctcgatgcacacccgcatattccg
atcgcctcattggatgccgataccgagcaacgtagcattacgctgatggcaccgtcgaag
acctttaatatcgctggactcggtgcgtcaatcgcgattatcccgaatgagcgtttgcgt
cgcgaatttgtccgcactcgcgccggcattgtgccgggggttgatattctggcgtatgtc
gcggcagaagcggcctacacccaaggcgaaccctggttacaggcacagctagactatttg
cgcgcgaaccgtgatctggtggaaagtcagattgcgcagatcccgggcttgcagatggcg
catactgaagcgacttatcttgcatggattgattgcagtgcgctaccggtagaaaaccca
catcgcttttttgaacaagcgggcgtcggcctctctccgggcaccgatttcggtaatgac
cgttttgtgcggttaaactttggttgtcgccgcacattactgcgtgaagcgctggatcgc
atggcaagcgctgtacaaggtttataa
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