Plesiomonas shigelloides: SAMEA2665130_1296
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Entry
SAMEA2665130_1296 CDS
T04378
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA2665130_1296 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshi03400
]
SAMEA2665130_1296 (nth)
Enzymes [BR:
pshi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SAMEA2665130_1296 (nth)
DNA repair and recombination proteins [BR:
pshi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMEA2665130_1296 (nth)
Prokaryotic type
SAMEA2665130_1296 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
SBT60821
LinkDB
All DBs
Position
1:complement(1466872..1467504)
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AA seq
210 aa
AA seq
DB search
MNQKKRIEILERLRAENPKPTTELKYSTPFELLIAVMLSAQATDVSVNKATDKLYPVANT
PQTILDLGVDGLKEYIKTIGLFNSKAENVIKTCRILLEQHQGEVPEDREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTGFAPGKNVNEVEQKLLKVVPAEFKLDVHHWLI
LHGRYTCIARKPRCGSCIIEDLCEFKEKTE
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaagaaacggatcgagatcttagaacgcctgcgggcagagaatcccaaacct
accactgaactgaaatacagtacgccgtttgagctgttgatagcggtgatgctgtcggcg
caagccaccgatgtaagtgtgaataaagcgaccgataaactctatccggtcgccaataca
ccacagactatcttggatttgggcgtagatgggctcaaggaatacatcaaaaccattggg
ctatttaacagcaaggcagaaaatgtcatcaagacctgccggattttgttagagcagcat
caaggggaagtaccagaggatcgtgaagcactggaagccttgccgggcgttggccgcaaa
acggctaacgtggttctgaacaccgcctttggttggccgaccattgcagtcgatacgcat
attttccgcgtctctaatcgtactggatttgcaccgggtaaaaacgtcaatgaggtggag
caaaagctgctcaaagtcgtccctgctgaatttaagctggatgtgcaccactggctgatt
ctgcacgggcgttatacctgcatcgcccgtaaaccacgctgtggctcgtgcatcatcgaa
gacttgtgtgaattcaaggaaaagaccgagtaa
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