Plesiomonas shigelloides: SAMEA2665130_2688
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Entry
SAMEA2665130_2688 CDS
T04378
Symbol
mdh
Name
(GenBank) Malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00020
Citrate cycle (TCA cycle)
pshi00270
Cysteine and methionine metabolism
pshi00620
Pyruvate metabolism
pshi00630
Glyoxylate and dicarboxylate metabolism
pshi00680
Methane metabolism
pshi00710
Carbon fixation by Calvin cycle
pshi00720
Other carbon fixation pathways
pshi01100
Metabolic pathways
pshi01110
Biosynthesis of secondary metabolites
pshi01120
Microbial metabolism in diverse environments
pshi01200
Carbon metabolism
Module
pshi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pshi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pshi_M00012
Glyoxylate cycle
pshi_M00168
CAM (Crassulacean acid metabolism), dark
pshi_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SAMEA2665130_2688 (mdh)
00620 Pyruvate metabolism
SAMEA2665130_2688 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
SAMEA2665130_2688 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SAMEA2665130_2688 (mdh)
00720 Other carbon fixation pathways
SAMEA2665130_2688 (mdh)
00680 Methane metabolism
SAMEA2665130_2688 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SAMEA2665130_2688 (mdh)
Enzymes [BR:
pshi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
SAMEA2665130_2688 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Semialdhyde_dh
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
SBT62134
LinkDB
All DBs
Position
1:complement(2951757..2952698)
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AA seq
313 aa
AA seq
DB search
MKVAVLGAAGGIGQALALLLKVQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG
EDPSAALEGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLVEKIAHVCPKACIGIITNP
VNTTVAIAAEVLKKAGVYDKRKLFGISTLDVIRSNTFVAELKGKQPEELNVSVVGGHSGL
SILPLLSQLDGISFTDAEIAALTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLLR
AMQGEKNVVECTYVEGDGQYARFFAQPVLLGVNGIEEYLPVGKLSAFEQQALESMLPTLR
EEIVLGEKFVNGQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgcggttttaggtgctgcaggtggcatcggccaggcactggctttactgtta
aaagtccagcttcccgctggttcagagctctccttatatgacatcgccccagtgactccg
ggtgtggcggtggatttgagtcatattccgactgccgtgaagatcaaaggctttagcggc
gaagatccttctgctgcgctggaaggggccgatatcgtgctgatctctgccggtgtggcg
cgtaagccaggcatggatcgctccgatctgtttaatgtgaatgcggggatcgtgcgcaat
ctggtggaaaaaatcgcccacgtttgcccgaaagcctgcattgggatcatcaccaatccg
gtgaacaccacggttgccattgcggcagaagtgctgaaaaaagccggcgtgtacgacaaa
cgcaagctgtttggtatttcaacgctggatgtgatccgctccaatacctttgtggctgag
ctgaaaggtaagcagccagaagaactgaatgtttccgtggttggcggtcactccggtctg
agcatcctgccgctgctgtcacaacttgacgggatctcctttaccgacgctgagatcgcg
gcgctgactaagcggatccaaaacgccggtaccgaagtggtggaagctaaagccggtggc
ggctccgcgactttgtcgatgggtcaagcggcggcgcgtttcggtctgtctttgctgcgt
gcaatgcagggcgagaagaacgtggtggaatgcacctatgttgaaggtgatggccaatat
gcccgtttctttgctcaaccggtactgctgggcgtcaacggtattgaagagtacctgcca
gtgggcaagctgagcgcgtttgaacagcaggcgctggaaagcatgctgccaaccctgcgt
gaagagattgtgctgggtgagaaattcgttaacggccagtaa
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