Plesiomonas shigelloides: SAMEA2665130_2807
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Entry
SAMEA2665130_2807 CDS
T04378
Symbol
bepD
Name
(GenBank) Efflux pump periplasmic linker BepD precursor
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi01501
beta-Lactam resistance
pshi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMEA2665130_2807 (bepD)
01503 Cationic antimicrobial peptide (CAMP) resistance
SAMEA2665130_2807 (bepD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pshi03036
]
SAMEA2665130_2807 (bepD)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshi02000
]
SAMEA2665130_2807 (bepD)
01504 Antimicrobial resistance genes [BR:
pshi01504
]
SAMEA2665130_2807 (bepD)
Chromosome and associated proteins [BR:
pshi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SAMEA2665130_2807 (bepD)
Transporters [BR:
pshi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SAMEA2665130_2807 (bepD)
Antimicrobial resistance genes [BR:
pshi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SAMEA2665130_2807 (bepD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Biotin_lipoyl_2
HlyD_D23
HlyD_3
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
SBT62239
LinkDB
All DBs
Position
1:complement(3082248..3083447)
Genome browser
AA seq
399 aa
AA seq
DB search
MTFRVVKAVRWKRHTLMIILAGSLVGCGDEPASSAQVAPVVPVVVETVQAKDVPLTTEMV
GETAGYREIEVRSRVGGILLKRHYVEGQPVVAGDLLFEIDPEPYKVALEQAKSLLAQESA
RLNKARADRARVIPLYKKQVVSRKDYDDVIASYEAAIASHQAAQAKVKEAELNLSYTRVT
APIDGMASKSTQSEGSLISTLGDNSLLTTITQYDPLYVNFSYSEQDRLNFERGIKSGAIQ
ARSAADWTTRIRLADGSLYSEVGKLNFSDNRVDGKTGTIRARAIFDNERGILLPGQFVRL
TIDLGTRKDAIVVPAKAIVQSQADRMLMVVDAENKVVPRPVKLGSVVESGVLIESGLQAG
ERYIVEGLMKARPGVVIQPVSVQEMSAISQKVVSASAAK
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacttttcgtgtggtaaaggctgtgcgctggaaacggcatacattaatgatcatcctt
gccggcagtttggttggttgtggtgatgagccggcctcatcggcacaggtagcgccagtg
gtgcctgtggtagttgaaactgtgcaggccaaggatgtgcctttaacaactgagatggtc
ggagagacggccggttatcgggaaattgaggtgcgttcacgggttggcggtattttgctt
aagcgccattatgtggaagggcaacctgtggtcgctggggacttactatttgagatcgat
ccagagccttataaagtagcactggagcaagctaaaagtttattagcgcaagagagtgct
cggttaaataaagcgcgtgccgatcgtgcacgggtgattccgttatataagaaacaagtt
gtcagccgaaaagattatgatgatgtgatcgccagttatgaggcggcaatcgcgagccat
caagcggcgcaagcaaaagtcaaagaggcggaattaaatcttagttatacccgagtgacc
gcgccaattgatggcatggccagtaaaagcactcagtctgaaggcagtttaatttcaact
ttaggtgataacagcttactgacgaccattacacaatatgaccccttgtacgtgaatttt
tcttattcggaacaagatcgacttaattttgaacgtggtattaaaagcggtgcgatacaa
gcacgtagtgcggcagattggacgacccgtattcgtttggccgatggctcattatattcg
gaagtaggcaaattgaacttttcggataatcgcgtagatggcaaaaccggcacgatccgg
gctcgggcaatttttgataatgagcgcgggatattgttgccggggcaatttgttcgtcta
accattgatttgggtacgcgcaaagacgcgatagtggtgccagcgaaggcgattgtgcag
tcacaggccgatcggatgctgatggtagtggatgcggagaataaggtggtacctcgaccg
gtgaaactgggctcggtggtggaaagtggggtgttgattgaaagtggcttgcaagcggga
gagcgttacatcgttgagggtttgatgaaagctcgccctggtgtggtgatccagccggta
tcggtacaagagatgagcgcgattagccagaaggttgtcagtgccagcgcggcaaaataa
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