Pseudomonas sp. HLS-6: CS390_19590
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Entry
CS390_19590 CDS
T12031
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
pshl Pseudomonas sp. HLS-6
Pathway
pshl01501
beta-Lactam resistance
pshl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pshl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CS390_19590
01503 Cationic antimicrobial peptide (CAMP) resistance
CS390_19590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshl02000
]
CS390_19590
01504 Antimicrobial resistance genes [BR:
pshl01504
]
CS390_19590
Transporters [BR:
pshl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CS390_19590
Antimicrobial resistance genes [BR:
pshl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CS390_19590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
TPR_INTS8_2
Motif
Other DBs
NCBI-ProteinID:
ATR84576
LinkDB
All DBs
Position
4179391..4182543
Genome browser
AA seq
1050 aa
AA seq
DB search
MSRFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAIAVTYPGASAQTVQDT
VVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNPDTAQVQVQNKLNLATPLLPQ
EVQQQGIRVTKAVKNFLMVIGLVSEDGSMSKDDLANYIVSNMQDPISRTAGVGDFQVFGA
QYAMRIWLDPAKLNNFQLTPVDVKTAVAAQNVQISSGQLGGLPALPGQQLNATIIGKTRL
QTAEQFEKILLKVNRDGSQVRLGDVAKIGLGGENYAVSAQFNGKPASGLAIKLATGANAL
DTARALRKTISELEPFFPQGMKAVFPYDTTPVVTESISGVIHTLIEAIVLVFLVMYLFLQ
NFRATVITTMTVPVVLLGTFGILAAAGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
SEEGLSPKEATKKSMGQIQGALVGIALVLSAVLLPMAFFGGSTGVIYKQFSITIVSAMAL
SVLVALIFTPALCATMLKAVPKGEHHVAKRGFFGWFNRNFDRSVRSYERGVGSMLRHKAP
YLLAYLIIVVGMVWLFTRIPTAFLPEEDQGVLFAQVQTPAGSSAERTQVVIDQMRSYLLE
QESDTVSSVFTVNGFNFAGRGQSSGLAFIMLKPWDQRSAENSVFNLAKRAQQHFFTFRDA
MVFAFAPPAVLELGNATGFDVFLQDRAGVGHAKLMEARNQFLGMAAQSKVLTAVRPNGLN
DEPQYQLTIDDERASALGVTIAEINSTLSIALGASYVNDFIDRGRVKKVYIQGEPGSRMN
PEDLQKWYVRNSIGEMVPFSSFAKGQWIYGAPKLSRYNGVEAMEILGAPAPGYSTGEAMA
EVERLAAQLPAGIGYSWTGLSYEERLSGSQAPALYALSLLMVFLCLAALYESWSIPIAVM
LVVPLGIIGALAATSLRGLSNDVYFQVGLLTTIGLAAKNAILIVEFAKELHEQGRSLIDA
AVEACRMRLRPIIMTSLAFILGVVPLAISSGAGSGSQHAIGTGVIGGMLTATVLAIFWVP
LFFVSVSSLFASKKPKADATPETPRYEAGQ
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagattctttatcgatcgcccgatcttcgcttgggtgatcgccttggtgatcatg
ctggtaggcgcactgtcgatcctcaagttgccaatcaaccagtatccaagcatcgctcca
ccggccattgccatcgccgtgacctacccaggtgcttcggcgcagacggtgcaggacacc
gtggtccaggtgatcgagcagcagctcaacgggatcgacaacctgcgttatgtgtcctcg
gaaagtaactccgatggcagcatgaccatcacggcgaccttcgagcagggtaccaacccc
gataccgcgcaggtccaggtgcagaacaaactgaacctggccaccccgctgctgccgcaa
gaagtgcagcaacagggtatccgcgttaccaaggcagtgaaaaacttcctcatggtaatc
ggcctggtgtccgaagacggcagcatgagcaaggacgacctggccaactacatcgtctcg
aacatgcaggacccgatctcgcgtaccgccggtgtcggtgacttccaggtgttcggtgcc
cagtacgcgatgcgtatctggctcgacccggccaagctgaacaatttccagctgaccccg
gtggatgtgaagacggcggttgccgcgcagaacgtccagatatcctccggccagctcggc
ggtctgcccgccctgcccggccagcaactgaacgcaaccatcatcggcaagacccgcctg
caaaccgccgagcagttcgagaagattctgttgaaggtcaaccgcgacggttcgcaggta
cgcctgggtgatgtcgccaagatcggtctgggcggcgaaaactacgcggtcagtgcccaa
ttcaacggcaaaccggcttcgggcctggcgatcaagctggcaaccggcgccaacgcgctg
gataccgccagggcgctgcgcaagaccatcagcgaactggagccgttcttcccgcaaggc
atgaaggcggtattcccgtatgacaccacgccagtggtcaccgaatcgatcagcggggtt
atccacaccctgatcgaagccatcgtgctggtgttcctggtgatgtacctgttcctgcaa
aacttccgcgccacggtcatcaccaccatgaccgtaccagtggtgttgctgggtaccttc
ggcatcctcgcggccgccggtttcagcatcaacacgctgaccatgttcggcatggtgctg
gccatcggcttgctggtggacgatgccatcgttgtggtggaaaacgtcgagcgggtgatg
tccgaagagggcctgtcacccaaagaagcaaccaagaaatccatgggccagatccagggc
gccctggttggtatcgccctggtgctgtcggcagtactgttgcccatggcgttctttggc
ggctccaccggggtgatctacaaacagttctccatcaccatcgtctcggccatggccttg
tcggtactggtagcgctgatcttcaccccggcactgtgtgccaccatgctcaaggcggtg
ccaaaaggtgagcatcacgttgccaaacgtggcttctttggctggttcaaccgcaacttc
gaccgcagcgtacgcagctacgagcgcggcgtgggcagcatgctgcggcacaaggccccc
tacctgttggcctacctgatcatcgtcgtcggtatggtctggctgttcacccgcattcca
acggcgttcctgccagaggaagaccagggtgtactcttcgcccaggtgcagacacctgca
ggctccagcgccgagcgcacacaggtggtcatcgaccagatgcgcagctatttgctggag
caggagtcggataccgtcagttcggtgtttaccgtcaacggcttcaactttgccggtcgt
ggtcagagctcgggcctggccttcatcatgctcaagccatgggaccagcgctctgctgaa
aacagcgtattcaacctggccaaacgtgctcaacagcatttcttcaccttccgagatgcc
atggtgttcgcgttcgcccctccggcagtactggaactgggcaacgccaccggcttcgat
gtgttcctccaggaccgcgccggtgtcggccacgccaagctgatggaagcccgtaaccag
ttcctcggtatggccgcgcaaagcaaggtactgactgcagtacgaccgaacggcctgaac
gatgaaccgcagtaccaactgaccatcgacgacgaacgcgccagtgccctgggtgtgacc
atcgccgagatcaacagcacactgtcgattgccttgggtgccagctacgtcaacgacttc
atcgaccgcggtcgggtcaagaaggtctatatccagggtgagcccggctcacggatgaac
ccggaagacctgcagaagtggtatgtgcgcaactcgatcggtgaaatggtgccgttctcc
tccttcgccaaaggccagtggatctatggcgcaccgaagctgtcgcgctacaacggtgtt
gaagccatggagatcctgggtgcgccggccccgggctacagtaccggtgaagcaatggct
gaagtcgagcgcctggcagcgcaactgcccgccggtatcggctattcatggaccggtcta
tcctacgaggagcggttgtccggctcgcaagccccagccctgtacgcgctgtcgctgctg
atggtgttcctctgcctggcagcactgtatgaaagctggtcgatcccgattgccgtcatg
ctggtcgtgccgctggggatcatcggtgcgctggctgccaccagcctgcgcggtctgtcc
aacgacgtgtacttccaggtcggtctgctgaccaccatcgggcttgctgcaaagaacgcg
atcctgattgtcgagttcgccaaagagctgcatgagcagggtcgcagcctgatcgacgcc
gcagtggaagcctgccggatgcgtctgcgcccgatcatcatgacgtcgctggcgttcatt
ctcggcgtggtacctctggctatctcaagcggtgcgggctcgggcagccagcatgctatc
ggtaccggcgttatcggcgggatgctgaccgccacggtactggccattttctgggtacca
ctgttcttcgtcagtgtgtcgtcgctgttcgccagcaagaagcctaaagccgacgccacc
cccgaaactccacgctatgaggctgggcaatga
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