Pseudoalteromonas shioyasakiensis: KQ246_04665
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Entry
KQ246_04665 CDS
T08873
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
psho
Pseudoalteromonas shioyasakiensis
Pathway
psho01501
beta-Lactam resistance
psho01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KQ246_04665
01503 Cationic antimicrobial peptide (CAMP) resistance
KQ246_04665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psho03036
]
KQ246_04665
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psho02000
]
KQ246_04665
01504 Antimicrobial resistance genes [BR:
psho01504
]
KQ246_04665
Chromosome and associated proteins [BR:
psho03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KQ246_04665
Transporters [BR:
psho02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KQ246_04665
Antimicrobial resistance genes [BR:
psho01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KQ246_04665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
YknX_C
BSH_CzcB
HH_EMRA
Beta-barrel_RND_2
HH_YBHG
BSH_CusB
HH_AAEA_pHBA
Biotin_lipoyl
BSH_YhbJ
TPR_MLP1_2
DUF7507
Motif
Other DBs
NCBI-ProteinID:
QWV05768
LinkDB
All DBs
Position
complement(1003322..1004527)
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AA seq
401 aa
AA seq
DB search
MRLPFAPAKLSLSALLLVSAPLLLQGCSEAPEQQQGQMHPAAVATMTMETHDAPFTIELP
ATLSGSKEVEVRARVTGILESRNFEEGQRVEQGQSLFTIDLEPYQLAVDRAQAALDGAKA
ALVQADRDVKRLAKLRAEKSVSQRDYDNASSANDIAKTDLAAAKVALKQAQLNLEYAQVK
APVAGVMGREFVSEGTYVSGPDLLLTQMTQFDPIRIRFGLSEREQLQMRQDVKNGSLTLP
EQGHWKTQIKLQDGSLYGQTGEVNFSDVRINPNTGTSEFQAIIPNPDFQLRPGQFVRVEL
SGAVRKNAFIVPQRAVLDNGTGKFVYVVSKNEQGMDVALPAPVTVGEWIKKPENEQYQNF
WLIRSGLKEGDQVIVDGMARIFFPGMPVNVGKPAANSSHAE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcctttcgcacctgccaaattatcattatctgcgttgttacttgtgtctgcc
cccttgctactgcaaggttgttctgaagcgccagagcagcaacagggtcaaatgcaccca
gcagctgtcgctactatgactatggaaacacacgatgcaccttttactattgagctgcca
gcaacgctgtctggttcaaaagaagttgaagttcgagcccgtgttaccggaatccttgaa
tcacgtaactttgaagaaggtcagcgtgtcgaacaaggccaatctctgtttactattgat
cttgaaccttaccaacttgcggttgatcgtgcgcaagctgcacttgatggtgcaaaagca
gcgcttgttcaagctgatcgtgacgttaaacgattagctaaactacgtgccgaaaaatct
gtttcacaacgcgattacgataacgctagttcagctaatgatattgcaaaaactgattta
gccgctgcaaaagttgcgttaaaacaagcccaacttaatcttgaatatgcgcaagtgaaa
gcccctgtcgcaggtgtaatgggacgtgagtttgtctcggaaggaacctatgtttctggc
ccagatttactactgactcaaatgactcagtttgaccctattcgtattcgttttggctta
tctgagcgtgaacaactgcaaatgcgtcaagatgttaaaaatggctcactgacgttacct
gagcaaggccactggaaaacacaaattaaactccaagacggctctttatacggacaaacc
ggtgaagttaacttctctgatgtgcgtattaatccaaacacaggtaccagtgagtttcag
gcaattattcctaaccctgattttcaacttcgtccgggccaattcgttcgcgttgagtta
agtggtgcagtacgtaaaaacgctttcatcgttccgcaacgtgcagtgctcgataacggc
acgggtaagttcgtttatgttgtaagtaaaaacgagcaaggtatggatgtcgcgttacct
gcccctgtcactgtgggtgaatggatcaaaaaaccagaaaacgagcaataccaaaacttt
tggttaattcgcagtgggttaaaagaaggcgaccaagttattgttgatggcatggcgcgt
attttcttcccgggtatgccagtaaatgttggcaagccagccgctaactcaagccacgca
gaataa
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