Pseudoalteromonas shioyasakiensis: KQ246_15435
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Entry
KQ246_15435 CDS
T08873
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
psho
Pseudoalteromonas shioyasakiensis
Pathway
psho01501
beta-Lactam resistance
psho01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KQ246_15435
01503 Cationic antimicrobial peptide (CAMP) resistance
KQ246_15435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psho03036
]
KQ246_15435
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psho02000
]
KQ246_15435
01504 Antimicrobial resistance genes [BR:
psho01504
]
KQ246_15435
Chromosome and associated proteins [BR:
psho03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KQ246_15435
Transporters [BR:
psho02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KQ246_15435
Antimicrobial resistance genes [BR:
psho01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KQ246_15435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CzcB
Beta-barrel_RND_2
BSH_RND
BSH_CusB
HH_EMRA
Biotin_lipoyl
BSH_YknX
HH_MFP_RND
HH_YBHG
OEP
Peptidase_M23
YqfD
HH_AprE
BSH_LcnD
CzcB_C
Bflower_3
PYNP_C
ProQ_C
DUF1635
YknX_C
DNA-SBD_ScoMcrA
DUF2019
Motif
Other DBs
NCBI-ProteinID:
QWV04731
LinkDB
All DBs
Position
3342649..3343710
Genome browser
AA seq
353 aa
AA seq
DB search
MQGKSKLIGSIIALFVIIVAVLYMAGSFSDKQAAGMKNPSANDYNGQLVTVTLADIARDE
VVPGTVIAKQNTQISSRVMAQVERLNVRAGDTVKQGDVLITLQQDDFKAGLAQSEAQINA
INASLTQAEKQLKRINDLYKQGLVSVSEYDDAKARFDNLTANLAIAKQQQTQAQVALSFT
QIKAPISGVVVERFAEPGDTATPGTPLLALYNPQQLQLAFNVREQQAIKLNVGQALTVKL
PALSTSMPATVTEIVPVADSAARSMEIRLETDVQTGLMPGLYAQLQLPLATEKGVLIDSS
WVHQYGQLSMVYLLENNLIVRRYVRLGEMVDGQQHIVSGLNPGDVLAVDFKTK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtaaatcaaaacttattggttcaattatcgcgttatttgtgatcattgtggcg
gtactttacatggcgggcagtttttctgataagcaagctgcaggcatgaaaaacccatcg
gcaaacgattacaatggtcagttagtgacagttacactggcagatatcgctcgtgatgaa
gttgtgccaggaaccgtgattgcaaaacaaaatacgcaaatctcatcgcgagttatggca
caagttgagcgtttgaatgtccgcgctggcgatactgtaaaacaaggtgatgtattgatc
accttgcagcaagatgactttaaagctgggcttgcacaaagcgaagcacaaataaacgca
attaatgcatcgctgactcaagcagagaaacagcttaaacgtatcaacgatttgtacaaa
caaggcttggtatctgttagtgaatacgacgatgctaaagcaaggttcgataatttaact
gcgaacctagcgattgctaaacaacagcaaacacaagcacaagtcgcgttgagttttacg
caaattaaagcgccgatttcaggtgttgtggttgagcgttttgcagaacctggcgatacc
gcaacccctggtacgccattactcgcactgtataacccacagcaattgcaattagcgttt
aatgtcagagaacaacaagcaattaaattgaatgttggccaagctctaacagtcaaatta
cccgctttatcaacgtcaatgcctgccactgtgacagaaatagtgcccgttgctgatagt
gctgcgcgcagtatggaaatccgtttagaaacagatgtgcaaactgggttaatgcctggg
ctttatgcgcagttacaattaccgctcgccactgaaaaaggggtgttgattgactcaagt
tgggtgcaccagtatggccaattgagtatggtttacttacttgaaaataatctgatagtg
cgtcgatatgtacgccttggcgaaatggttgatgggcagcagcacatcgtttcaggttta
aacccaggtgatgtgctagctgttgattttaaaactaaataa
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