Pseudoalteromonas shioyasakiensis: KQ246_18645
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Entry
KQ246_18645 CDS
T08873
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
psho
Pseudoalteromonas shioyasakiensis
Pathway
psho01501
beta-Lactam resistance
psho01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KQ246_18645
01503 Cationic antimicrobial peptide (CAMP) resistance
KQ246_18645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psho03036
]
KQ246_18645
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psho02000
]
KQ246_18645
01504 Antimicrobial resistance genes [BR:
psho01504
]
KQ246_18645
Chromosome and associated proteins [BR:
psho03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KQ246_18645
Transporters [BR:
psho02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KQ246_18645
Antimicrobial resistance genes [BR:
psho01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KQ246_18645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
BSH_CzcB
HH_EMRA
Beta-barrel_RND_2
BSH_CusB
HH_YBHG
YknX_C
HH_CzcB
HH_AAEA_pHBA
HH_CyaD
BSH_LcnD
YnfE
LptM_cons
Motif
Other DBs
NCBI-ProteinID:
QWV07050
LinkDB
All DBs
Position
megaplasmid:260187..261350
Genome browser
AA seq
387 aa
AA seq
DB search
MQRSRIPFFAVSALAGAVLLSGCGQSESAQGQTQAVQAVPVGVIEMQSKPLTLTKELPGR
VAASRIAQIRPQVNGIIQSRMFVEGAEVEKGQALYQIDPSTFEAEVATSKAAITKAQASI
ANAKAKAERYKELLSIKAVSQQDYDEADAAYKGAKADLLTAQAQLKTAEINLNYSKVLAP
ISGQIGKSDVTAGALVSANQATALATITQLDPIYVDLTQSSSELTRLKKAIAAGELDKDA
ALHSKVELKMEDGSTYQHKGTLQFSEVTVDPSTGSVTLRAEFPNPEKLLLPGMYVRAVIV
EGVKNDAILAPQRGVSRNTKGEPTAMVVSKDNTVEARVLKTDRTVGSNWLVTDGLNNGDK
LIVEGLQKIRPGAPVNAMPAESVANSQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgctctcgcattccattttttgcagtgtcagctttggctggtgctgttttatta
tcaggctgcggccaatcagaatcggctcaagggcaaacgcaggcagttcaagctgtacct
gttggcgttattgagatgcaaagcaaacctcttacgctaactaaagaattgccaggtcgt
gtcgctgcttcacgtatcgcgcaaattcgtccgcaggttaacggtattattcagtcgcgt
atgttcgttgaaggtgctgaagttgaaaagggccaagccttatatcaaattgatccgtct
acatttgaagctgaagtagctaccagcaaagctgctattactaaagctcaagcaagtatt
gcgaatgccaaagcaaaagcagaacgctataaagagctattaagtatcaaagctgtaagc
caacaagattatgatgaagcagatgctgcatataaaggtgcaaaagcagacttactaaca
gctcaggcgcagcttaaaacagctgaaattaacttgaactatagcaaagtattagcacca
attagcggccaaattggcaaatcagatgtaacagcaggtgccctagttagcgctaatcaa
gcaactgcgttagcaacaattactcagctagatcctatttatgttgatttaactcaatcg
agcagtgaattaacacgtttgaaaaaagcgatcgctgccggtgaacttgataaagatgct
gctttacattcaaaagttgagttaaagatggaagatggcagcacttatcaacataaaggc
acgttacaattctcagaagtaacggttgacccaagcactggctcagtcactttacgtgct
gaatttcctaatcctgaaaaattacttctgcctggtatgtatgttcgcgcagtgattgtt
gaaggtgtcaaaaacgatgcgattttagcaccacagcgcggtgtcagtagaaataccaaa
ggtgagcctactgccatggttgtaagcaaagacaacaccgtagaagcacgcgtgcttaaa
actgatcgtactgttggttcaaactggttagtgacagacggcctaaacaatggcgataag
ttgattgttgaaggtttacagaaaatccgcccaggtgcaccagtcaatgcaatgcctgca
gaatcagtagctaacagccagtaa
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