Pseudooceanicola spongiae: F3W81_07670
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Entry
F3W81_07670 CDS
T06866
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pshq
Pseudooceanicola spongiae
Pathway
pshq00300
Lysine biosynthesis
pshq00550
Peptidoglycan biosynthesis
pshq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F3W81_07670
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F3W81_07670
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pshq01011
]
F3W81_07670
Enzymes [BR:
pshq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
F3W81_07670
Peptidoglycan biosynthesis and degradation proteins [BR:
pshq01011
]
Precursor biosynthesis
Amino acid ligase
F3W81_07670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
AAA_30
DUF2249
Motif
Other DBs
NCBI-ProteinID:
QOL83139
UniProt:
A0A7L9WS66
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Position
complement(1609447..1610952)
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AA seq
501 aa
AA seq
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MADRNGVSGGQSKSLAQLGLHARAGRMAQVSGLAVDSRDIEAGFLFAALPGTKIHGAAFI
ATALRMGAAAILTDAEGARLAERELAASDAALVIAEDPRQALACAAALWFGAQPAVVAAV
TGTNGKTSVATFLRQIWQAQGNKAINLGTTGVEGDFTYPLAHTTPEPITLHRILAQAAAA
GVTRCAMEASSHGLSQRRLDGVMLRGAGFTNLTQDHLDYHASFEEYFAAKAGLFTRVLPP
DGYAVINIDGARGPDMAEAAEMRGIDVLTVGMHRDAEMRIMARRFEPHGQILRVAFNDEE
YQVHLNLIGGFQAENVLVAAGLAILTGEPPDEVFDVLPQLTGVRGRMQLAATRANGAAVY
VDYAHTPDAVATALKALRPHVMGRIVAVIGAGGDRDRTKRPLMGQAAAENADLVFVTDDN
PRSEDPASIRASVMLGCPEAIEVADRAEAILRAVDSLGPGDALLVAGKGHESGQIIGQTT
YPFDDVEQSSVAVAALDGRLA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggaatggcgtttcaggcgggcagagcaagtctctcgcgcaactcgggctg
catgcccgcgccgggcgaatggcgcaggtcagcggcctggcggtcgacagccgggatatc
gaagcggggtttctgttcgccgccttgcccggcaccaagatccatggcgcggcctttatt
gccaccgccctgcgcatgggcgccgccgcgatcctgaccgatgccgagggggcgcgtctg
gccgagcgtgagctggccgcctccgacgccgccctcgtgatcgccgaagatccacgtcag
gcgctggcctgcgccgccgcactctggttcggtgcccagccggccgttgtcgcggccgtc
accggcaccaacggcaagacctccgttgcgaccttcctgcgccaaatctggcaggcgcag
ggcaacaaagcgatcaacctcggcaccaccggggtcgagggcgatttcacctatccgctg
gcgcacaccacgcccgaacccatcaccctgcaccgcattctggcgcaggctgccgccgcc
ggcgtgacccgctgcgcgatggaggcctcctcgcacggtctgtcgcaacgccgtcttgat
ggcgtgatgctgcgcggcgcgggcttcaccaacctgacgcaggaccacctcgattatcac
gcctcgttcgaggaatatttcgccgccaaggccggtctcttcacccgcgtcctgccgccc
gatggctatgcggtgatcaatatcgacggcgcgcgcggccccgacatggccgaagcggca
gagatgcgcggcattgacgtgctcaccgtcggcatgcaccgcgacgccgaaatgcgcatc
atggcgcgccggtttgaaccgcacggccagatcctgcgcgtcgccttcaatgacgaggaa
tatcaggtccacctgaacctgatcggcggatttcaggcggaaaacgtcctcgtcgccgct
ggcctcgcaattctgacgggcgagccgccggatgaggtcttcgacgttctgccgcagctg
accggcgtgcgcggccgcatgcagctggccgcgacccgtgccaatggcgccgccgtctat
gtcgattacgcccatacgcccgatgccgtggccaccgcgctcaaggcgctgcgcccgcat
gtcatgggccgaatcgtcgccgtcatcggggcagggggcgaccgtgatcgcaccaagcgc
ccgctgatggggcaggccgccgctgaaaacgccgatctggtctttgtcaccgatgataac
ccgcgctccgaggatcccgccagcattcgtgcgtcggtcatgctcggctgtcccgaggcc
atcgaggtcgccgaccgcgccgaggcgatcctgcgggccgttgattccctcgggcccggc
gacgctctgctggtcgcaggcaaggggcacgagagcggccagatcatcggccagaccacc
tatccctttgacgacgtggaacaatcctccgtcgccgttgccgcacttgatggacgcctc
gcatga
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