Pseudooceanicola spongiae: F3W81_12200
Help
Entry
F3W81_12200 CDS
T06866
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pshq
Pseudooceanicola spongiae
Pathway
pshq01501
beta-Lactam resistance
pshq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F3W81_12200
01503 Cationic antimicrobial peptide (CAMP) resistance
F3W81_12200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pshq03036
]
F3W81_12200
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshq02000
]
F3W81_12200
01504 Antimicrobial resistance genes [BR:
pshq01504
]
F3W81_12200
Chromosome and associated proteins [BR:
pshq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
F3W81_12200
Transporters [BR:
pshq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
F3W81_12200
Antimicrobial resistance genes [BR:
pshq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
F3W81_12200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
BSH_CzcB
YknX_C
BSH_CusB
Biotin_lipoyl
Beta-barrel_RND_2
HH_EMRA
BSH_YknX
HH_AAEA_pHBA
Phage_portal_3
Motif
Other DBs
NCBI-ProteinID:
QOL81521
UniProt:
A0A7L9WMB3
LinkDB
All DBs
Position
complement(2598236..2599489)
Genome browser
AA seq
417 aa
AA seq
DB search
MQVFGVSSLARDFLSRISVTIPCLVVALSLGISQGALAQGRPPTGPSEVGVVALAQQSVP
YTVTLPGRAVAHDQTEVRPRVEGVIEEIAYTSGATVSAGDLLFRLDSDTYEAALEAAKAA
KVSAESALAAATSTVTRYRKLNGVGITQSDLDSAEAGLAQAQANVASAAAALKTAQLNLD
RTDIRSPINGIVDLPQFSVGALVTANQSDPLTTVTSINPIYVDVQESSARMLRVRNRIEM
GTLQPVDPLGIVLTLETGATYEGAGTLVSPRIQVSTTTGSLDFRIQFDNPDRLILPGQFL
RVALTLGTTQAILVPQRATSRSSDGSLTAYLARDGIAHEVTLTAQGAYQNAWIVTDGVAP
GDQLIVDGLRNLKAGAEITTIPVTIDKDGLVEETPGTQAPGGATPEGQAPAAPKAGE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtattcggagtaagcagtttggccagagatttcctttcgcgcatatcggtgacg
attccctgtctggttgtcgcgctgagccttgggatatcgcagggcgcgctggcgcagggg
cgtccgccgacggggccgagcgaagtgggcgtggttgcgctggcgcagcagagcgtgccc
tatacggtgaccctgccggggcgcgccgtggcccatgaccagaccgaagtgcgcccgcgc
gtcgagggcgtgatcgaggagatcgcctatacctccggggcgacggtttcggcgggggat
ctgctgttccggctggacagcgacacctatgaggcggcgctggaggccgcgaaggccgcc
aaggtcagtgccgaatccgcgttggcggcggcgacctcgaccgtcacgcgctatcgcaag
ctcaacggtgtcggcatcacccagtccgatctggacagcgccgaggccggactggcgcag
gcgcaggccaatgtcgcctccgcggcggcggcgctgaagaccgcgcagctgaacctggac
cgcaccgacatccgcagcccgatcaatggcatcgtcgatctgccgcagttttcggtcggg
gcgctggtcaccgccaatcagagcgatcccctgaccaccgtcacctcgatcaacccgatc
tatgtcgatgtgcaggaaagctcggcccggatgctgcgggtgcgcaaccggatcgagatg
ggcaccctgcagcccgtcgatccgctgggcatcgtgctgacactggaaaccggcgcgacc
tatgagggggcgggcacgctggtcagcccgcgcatccaggtctcgaccaccacgggcagt
ctcgatttccgcattcagttcgacaaccctgaccggctgatcctgccggggcagttcctg
cgcgtcgccctgacgctggggacaacgcaggcgatccttgtgccgcaacgcgccacctcg
cgcagctcggacggatcgctgaccgcctatctcgcgcgcgatggcatcgcacatgaggtc
acgctgaccgcgcagggcgcctatcagaacgcctggatcgtcaccgatggcgttgcgccg
ggcgaccagctgatcgtcgacgggctgcgcaacctcaaggcgggggccgagatcaccacc
atccccgtcaccatcgacaaggatggtctggtcgaggaaacgcccggcacacaggcaccg
ggaggcgcgacgcccgaaggtcaggctccggccgccccgaaagccggagaataa
DBGET
integrated database retrieval system
