Pseudomonas sp. HS6: JJN09_04960
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Entry
JJN09_04960 CDS
T09971
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs01501
beta-Lactam resistance
pshs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JJN09_04960
01503 Cationic antimicrobial peptide (CAMP) resistance
JJN09_04960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pshs03036
]
JJN09_04960
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_04960
01504 Antimicrobial resistance genes [BR:
pshs01504
]
JJN09_04960
Chromosome and associated proteins [BR:
pshs03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JJN09_04960
Transporters [BR:
pshs02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JJN09_04960
Antimicrobial resistance genes [BR:
pshs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JJN09_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
UQS16215
LinkDB
All DBs
Position
complement(1066478..1067635)
Genome browser
AA seq
385 aa
AA seq
DB search
MSKNLLAGLGLIALALTLGACGKSSSTEEEAPPATVRVETLEARPLSISSELSGRIAAPR
IAEVRARVAGVVLQRTYREGSDVKKGDVLFRIDPAPFKADLDSAEAALRKAEANAFQAKL
QEQRYAQLIDDKAISAQDYDNARANARQTAADVAANKAAVERAKLNLGYATVTAPISGRV
GRALVTEGALVGQNETTPLALIQQLNPIHADLTQSTRELNELRRAFRSGQLQQVGQDQVK
ATLIQDDGSLYPLPGKLLFSDITVDPGTGQIILRSEFPNPDLDLLPGSYVRVRLEQGVIQ
HGLTVPQRAVQRDSAGVAQVLTVDDQMRVAQQPVQLGAVQNDRWIVTGGLKPGDRIVIEG
LQHARPGEVVQIDDTPLPLAQTSGQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaatctgctggccgggctcggcctgatcgcattggcgctgacgctgggtgcc
tgtggtaaatcctcgagcactgaggaagaggcgccaccggccaccgtgcgggtcgaaacc
cttgaggcgcgccccctgtcgatcagcagcgaactgagcgggcgcattgccgcgccacgc
atcgccgaagtccgcgcccgagtggccggtgtcgtgctgcaacgcacttaccgcgaaggc
agcgacgtgaaaaagggcgacgtgctgttccgcatcgatccggcgccattcaaggcagac
ctggacagcgccgaagccgccctgcgcaaggccgaagccaacgcgttccaggcgaaactg
caggagcagcgctacgcccagttgatcgacgacaaggccatcagcgctcaggactacgac
aacgcccgcgccaacgcccggcaaacggccgccgacgtcgctgccaacaaggctgctgtc
gagcgagcgaagctgaacctcggttacgccaccgtcaccgcgccgatttccggccgtgtc
ggccgcgccctggtgaccgaaggcgcattggtcggccagaacgaaaccacgccactggcg
ctaatccagcaactgaacccgattcacgccgacctcacccagtcgacccgtgaattgaat
gagttgcgccgagcgttccgttccggccagttgcagcaggtcggccaggatcaggtcaag
gccacgctgatccaggacgacggcagcctctatccgctaccgggcaaattgctgttcagc
gacatcacggtcgatccgggcaccggtcagatcatcctgcgcagcgagttccccaacccg
gacctcgatttgctgcccggcagctacgttcgtgtgcgtctggaacaaggcgtgattcaa
cacggcctcaccgtgcctcaacgtgcggtacaacgtgacagcgccggtgtagcgcaggtc
ctgacggtcgacgatcagatgcgggtcgcccagcagccagttcaactgggcgccgtgcag
aacgaccgctggatcgtcaccggcggcctcaagcctggcgaccgcattgtcatcgaaggc
ctgcaacacgcccgtccgggcgaagtggtgcagatcgacgacacccctcttccacttgcc
cagacctctggtcagtaa
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