Pseudomonas sp. HS6: JJN09_28445
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Entry
JJN09_28445 CDS
T09971
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs00300
Lysine biosynthesis
pshs00550
Peptidoglycan biosynthesis
pshs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JJN09_28445
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JJN09_28445
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pshs01011
]
JJN09_28445
Enzymes [BR:
pshs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
JJN09_28445
Peptidoglycan biosynthesis and degradation proteins [BR:
pshs01011
]
Precursor biosynthesis
Amino acid ligase
JJN09_28445
BRITE hierarchy
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PipB2_N
DUF4823
Motif
Other DBs
NCBI-ProteinID:
UQS15094
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Position
complement(6300048..6301511)
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AA seq
487 aa
AA seq
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MSLSLNKIFPHAGHDLLIRELALDSRNVRAGDLFLAVPGGKFDGRAHIADALTRGAAAVA
YEVEGATVLPITDVPLIPVKGLAAQLSDIAGRFYGEPSHHLNLVGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGSGFYGALQSGLHTTPNPIAMQATLGDLKKAGAKAVAMEVSSHG
LDQGRVTSLAFDVAVMTNLSRDHLDYHGTMEAYAEAKAKLFAWNDLKCRVVNLDDDFGRQ
LAAEKRESRLITYSLLDNSAYLYVREAQFDDHGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAVGALLGLDYALDEILKVLPKLEGPAGRMQRLGGGTQPLVVVDYAHTPDALEKVLTAL
RPHVKGQLLCLFGCGGDRDRGKRPLMAEVVERLADRVLVTDDNPRTEDPAVIFDDIRAGF
AAVDNVSFVAGRGQAIAQLIASASADDVVVLAGKGHEDYQEINGERHAFSDLVEADHALT
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttagtctgaacaagattttcccccacgccggccacgatctgttgatccgtgaa
ctggcgctcgacagccgtaacgtgcgcgcgggcgatctgttcctcgcggtgccgggcggc
aagttcgacggtcgtgcgcacattgctgatgcgctcacccgtggtgcggccgccgtggct
tatgaagtggaaggcgccaccgtactgccgatcactgacgtgccgttgattccggtcaaa
ggcctggccgcgcagctgtcggatatcgccggccgtttttacggtgagccaagtcatcac
ctgaatctggtgggcgtgaccggcactaacggcaaaaccagcgtgactcaactggttgcc
caggcgctggacctgctcggccagcattgcggcatcgtcggcaccctcggctccggtttc
tacggcgcgctgcaaagcggcctgcacaccacgccgaatccgatcgccatgcaagcgact
ctgggcgacctgaaaaaggccggcgccaaagccgtggccatggaagtctcgtcccatggt
ctggatcagggccgagtcacctcgctggcgttcgacgtcgcggtgatgaccaacctgtcc
cgcgatcacctcgattatcacggcaccatggaggcctacgccgaagcgaaggccaagctg
ttcgcatggaatgatctgaagtgccgagtggtcaatctggacgacgatttcggtcggcaa
ctggctgctgaaaaacgtgagtcgcgcctgatcacttatagcctgctcgacaacagcgcc
tatctttatgtccgcgaagcgcagttcgacgaccacggcgtgcgcgccacgctggtcacg
ccgcagggcgaacatcatctgcgcagcacattgctgggccgtttcaacctgagcaacgta
ttggccgcagtcggtgccttgcttggcctggattacgccctcgacgaaatcctcaaggtg
ctgccgaaactcgaaggcccggccggacgcatgcagcgtctcggcggtggcacccagcca
ctggtggtggtcgattacgcccacacgccggatgcgctggaaaaagtcctgactgcgctg
cgtccacacgtcaaaggccagttgctgtgcctgttcggctgtggcggtgaccgtgatcgc
ggcaagcgcccgttgatggccgaagtggtcgagcgtctggccgaccgcgtgctggtcacc
gatgacaatccgcgtaccgaagatccagcggtgatcttcgatgacatccgtgccggtttt
gcggctgtggataacgtgtcgttcgtggccggccgtggccaggccattgcgcaactgatc
gccagcgcctcggcggatgacgtggtggtcctggccggcaagggtcacgaggactatcag
gaaatcaacggcgagcgccatgcattctccgatctggtcgaggctgatcacgccctgacc
gcgtgggaggtggcccatgcttaa
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