Pseudomonas siliginis: NF676_08430
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Entry
NF676_08430 CDS
T08569
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
psii
Pseudomonas siliginis
Pathway
psii00020
Citrate cycle (TCA cycle)
psii00785
Lipoic acid metabolism
psii01100
Metabolic pathways
psii01110
Biosynthesis of secondary metabolites
psii01120
Microbial metabolism in diverse environments
psii01200
Carbon metabolism
psii01210
2-Oxocarboxylic acid metabolism
Module
psii_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psii_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NF676_08430
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NF676_08430
Enzymes [BR:
psii01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
NF676_08430
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
cwf21
Motif
Other DBs
NCBI-ProteinID:
UST81337
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All DBs
Position
1776219..1779050
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AA seq
943 aa
AA seq
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MQESVMQRMWNSAYLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPADGNSATDVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAQLDPLGLWQ
RPAPADLSINHYGLTNADLDTTFRAGDLFIGKEEASLREIHEALQQTYCRTIGAEFTHIT
DSEQRQWFQQRLESVRGRPTYSADIKSHLLERVTAGEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDELIQRSGSYGTKEVVIGMAHRGRLNVLVNTFGKNPRELFDEFEGKKKVELGSGD
VKYHQGFSSNVMTTGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDLTGEKVLPISI
HGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQVGFTISNPLDSRSTEYATDVAKM
IQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVIDLVCYRRRGHNEADEPSGTQPLMY
QQITKQRTTRELYADRLTQAGVLDAERVQAKVDEYRNALDNGLHVVKSLVKEPNKELFVD
WRPYLGHAWTARHDTRFDLKTLQELSAKLLEIPEGFVVQRQVAKIYEDRQKMQAGGLPIN
WGYAETMAYATLAFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDAGTYIPLQNLYDGQPRF
DLYDSFLSEEAVLAFEYGYSTTTPNALVIWEAQFGDFANGAQVVIDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNIQVCMPTTPAQIYHLLRRQVIRPLRKP
LVVLTPKSLLRHKLAISTLEDLAEGSFQTVIPEIDALDPKKVERVVLCSGKVYYDLLEKR
RAEGREDIAIVRIEQLYPFPEDDLKEVLAPYTNVKHAVWCQEEPMNQGAWYCSQHHLRRS
IANLDKTLVLEYAGREASAAPACGYASMHAEQQEKLLQDAFTV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtgatgcagcgcatgtggaacagcgcctacctttcaggtggaaacgct
gcctatgtggaagagctttatgagctctacctgcacgaccctaacgctgtgccagaagag
tggcgcacctactttcagaagttgccagccgacggcaactctgccactgatgtttcgcac
tcgacgattcgcgatcatttcgtgctgctggcaaagaaccagcgccgcgcccaaccggtt
tccgccggcagcgtgagcagtgagcacgagaagaagcaagttgaagtgctgcgattgatc
caggcctaccgtatgcgtggccaccaggcagcccagcttgacccgctggggctgtggcag
cgtcctgcacctgcagacctgtcgatcaatcattacggcttgaccaatgccgatcttgat
acgaccttccgtgccggcgacctgttcatcggcaaagaggaagcgagcctacgcgaaatt
cacgaagcgttgcagcagacatattgccgcaccatcggcgctgaattcacgcacatcacc
gattccgagcagcgccagtggttccagcagcgtctggaaagcgtgcgtggccgtccgacg
tactccgccgacatcaagagccacctgcttgagcgcgtgactgccggtgaaggcctggaa
aaatacctcggtaccaaatacccgggcaccaagcgtttcggtctggaaggcggcgaaagc
ctgattccgatgctcgacgaactgatccagcgttccggctcgtacggcaccaaggaagtc
gtcatcggcatggcccaccgtggccgtctgaacgttctggtcaataccttcggcaagaac
ccgcgcgagctgttcgacgagttcgaaggcaagaagaaggtcgagctcggttccggtgac
gtcaaataccaccagggcttctcgtccaacgtgatgaccaccggcggtgaagttcacctc
gccatggcgttcaacccgtcccacctggaaatcgtttccccggttgtcgaaggttcggtg
cgcgcccgtcaggaccgtcgcaacgacctgaccggtgagaaggtactgccgatctccatc
cacggtgacgcggcatttgccggtcagggcgtggtcatggaaaccttccagatgtcgcag
acccgcggtttcaagaccggcggtaccgtgcacatcgtgatcaacaaccaggtcggtttc
accatcagcaacccgctggactcgcgttccaccgagtacgccaccgacgtcgccaagatg
atccaggcgccgatcctccatgtgaatggcgatgatccggaagccgtgctgttcgtgacc
caactggccatcgactaccgcatgcagttcaagcgtgacgtggtgatcgatctggtctgc
taccgtcgtcgcggccacaacgaggccgacgagccaagcggcacccagccactgatgtat
cagcagatcaccaagcagcgcaccacccgtgagctgtacgctgatcgcctgactcaggcc
ggtgtgcttgacgctgaacgcgttcaggccaaggtcgacgaataccgcaacgcgctggac
aacggtctgcacgtagtgaaatcgctggtcaaagagccgaacaaagagctgttcgtcgac
tggcgtccgtacctgggccacgcctggactgcgcgtcacgacacgcgtttcgatctgaag
accctgcaagagctgtccgccaagctgctggaaattccggaaggcttcgtcgttcagcgc
caggtcgcgaagatctacgaagaccgtcagaagatgcaagccggcggcctgccgatcaac
tggggttacgctgaaaccatggcgtacgcgaccctcgcgttcgaaggtcacccgatccgc
atgaccggtcaggacatcggccgcggtacgttctcgcaccgtcacgctgtgttgcacaac
cagaaagacgcgggcacctacattccgctgcagaacctgtacgacggtcagccacgtttc
gacctgtacgactcgttcctctcggaagaagcggtactggcattcgaatacggttactcg
accaccacgccaaacgcgctggtgatctgggaagcccagttcggcgacttcgccaacggt
gctcaggtcgtgatcgaccagttcatcaccagcggcgagcacaagtggggccgtctctgc
ggtctgaccatgctgctgccacacggttacgaaggccaaggccctgagcacagctcggct
cgtcttgagcgttacctgcagctgtgcgccgagcacaacattcaggtgtgtatgccgacc
acgccagcgcagatctaccacttgctgcgtcgtcaggtgatccgtccgctgcgcaagccg
ctggtcgtgctgacgccgaagtcgctgctgcgccacaagctggccatctcgacgctggaa
gatctggccgaaggttcgttccagaccgtgatcccggaaatcgatgcactggacccgaaa
aaggtcgagcgcgtggttctgtgcagcggcaaggtctactacgacctgctggaaaaacgc
cgtgccgaaggccgcgaagatatcgccatcgtgcgtatcgagcagctgtatccgttccct
gaggacgacttgaaagaagtcctggctccatacaccaacgtcaaacacgccgtttggtgt
caggaagagccgatgaaccagggtgcctggtactgcagccagcatcacttgcgtcgcagc
atcgccaacctcgacaagactctcgtacttgagtacgcgggccgtgaggcttcggctgcg
ccagcttgtggttacgcatcgatgcacgccgagcagcaggaaaaactgctgcaagatgct
ttcactgtttaa
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