Pseudomonas siliginis: NF676_14585
Help
Entry
NF676_14585 CDS
T08569
Name
(GenBank) efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
psii
Pseudomonas siliginis
Module
psii_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psii02000
]
NF676_14585
01504 Antimicrobial resistance genes [BR:
psii01504
]
NF676_14585
Transporters [BR:
psii02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NF676_14585
Antimicrobial resistance genes [BR:
psii01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
NF676_14585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF5693
Motif
Other DBs
NCBI-ProteinID:
UST77401
LinkDB
All DBs
Position
3167912..3171103
Genome browser
AA seq
1063 aa
AA seq
DB search
MNFSQFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIG
ETVAAPLEQAITGVENMLYMSSQSTADGKITLTITFALGTDLDNAQVQVQNRVTRTEPKL
PEEVTRIGITVDKASPDLTMVVHLTSPDKRYDMLYLSNYAILNIKDELARLGGVGDVQLF
GMGDYSLRVWLDPNKTASRNLTATDVVTAIREQNRQVAAGQLGAPPAPTAQSFQLSVNTQ
GRLVSEEEFENIVIRAGDDGEITRLKDIARIELGSSQYALRSLLNNQPAVAIPIFQRPGS
NAIDISNEVRGKMEELKKGFPQGMDYSIVYDPTIFVRGSIEAVVHTLFEALILVVLVVIL
FLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFGLVLAIGIVVDDAIVVVENVE
RNIELGLTPVEATKRAMREVTGPIVATALVLCAVFIPAAFISGLTGQFYKQFALTIAIST
VISAFNSLTLSPALAAVLLKSHDAPKDRFSKVLDRIFGGWLFRPFNRFFDRASHGYVGTV
RRVIRSSGIALLVYAGLMVLTFFGFSSTPTGFVPGQDKQYLVAFAQLPDAASLDRTEDVI
KRMSDLALKQPGVESAVAFPGLSINGFTNSPNAGIVFVTLKPFDERKDPSMSAGAIAGAL
NGQYANIQEAYMAIFPPPPVQGLGTIGGFRLQIEDRGNLGYDELYKETMNIINKSHNVPE
LAGLFTSYTVNVPQVDAAIDREKAKTHGVAVSDIFDTLQIYLGSLYANDFNRFGRTYQVN
VQAEQQFRLESDQIGQLKVRNNKGEMIPLATFIKVSDTSGPDRVMHYNGFITAEINGAAA
PGYSSGQAEKAIEKLLKEELPNGMTYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ
YESWSLPLAVILIVPMTLLSAITGVIISGGDNNIFTQIGLIVLVGLACKNAILIVEFAKD
KQEEGLDPLAAVLEACRLRLRPILMTSFAFIMGVVPLVFSSGAGAEMRHAMGVAVFSGML
GVTFFGLLLTPVFYVLIRNFVERGEQRKAAKAHTLQKPLEAQQ
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttcccaattcttcatttcccggccgatcttcgcagcggtgctgtcgctgttg
atcctgatcgccggcgcgatctcgctgttccagttgccgatcagcgaatacccggaagtc
gtgccgccgaccgtggtcgtgcgcgccaacttcccgggcgccaaccccaaagtcatcggt
gaaaccgtggccgctccgctggagcaggccatcaccggcgtcgagaacatgctgtacatg
tcctcgcagtcgaccgccgacggcaagatcaccctgaccatcaccttcgccctgggcact
gacctggacaacgcgcaggtgcaggtgcagaaccgggtgacccggaccgagccgaagctt
cccgaggaagtgacgcgcatcggtatcaccgtcgacaaggcttcgcccgacctgaccatg
gttgtgcacttgacctcaccggacaagcgctacgacatgctctacctgtccaactacgca
atcctcaacatcaaggatgagcttgctcgcctgggtggtgtcggtgacgtgcagttgttc
ggtatgggcgactactcgctacgcgtctggcttgacccgaacaagaccgcttcgcgcaat
ctgaccgccaccgatgtggtgaccgcgattcgcgagcagaaccgtcaggtcgccgccggt
caactgggcgcgccccctgccccgaccgcacaaagtttccagctgtcggtcaacactcaa
ggccgtctggtttccgaagaagagttcgagaatatcgtcattcgcgcaggcgacgacggt
gagatcactcgcctgaaggacatcgcacgcattgaactgggttccagccaatacgccttg
cgctcgctgctgaacaatcagccggctgtagcgattccgatcttccagcgtcccggttcc
aacgccatcgacatttccaacgaagtgcgcggcaagatggaagagctgaagaaaggcttc
ccgcagggcatggactacagcatcgtgtatgacccgacgatcttcgttcgtggctcgatc
gaggcggtggttcacaccctgttcgaagcgctgatccttgtggtgctggtggtgattctg
ttcctgcagacctggcgcgcctcgatcatcccgttggtggcagtgccggtatcgttgatc
ggtacgtttgcggtcatgcacctgttcggtttctcgctcaacgccctgtcgttgtttggc
ctggtactggccatcggtatcgtggtggatgacgccatcgtcgtggtggaaaacgtcgaa
cggaacatcgaactcggcctgacgccggtcgaagcgaccaagcgcgccatgcgggaagtg
accgggccgatcgtggccaccgcactggtgctgtgtgcggtgttcattccagcggcgttc
atttccggcctcaccgggcagttctacaaacagttcgcactgaccatcgctatctcgaca
gtgatctcggcgttcaactcgctgaccttgtcgccagcattggccgctgtgttgctgaaa
agtcacgacgcgccgaaagaccgtttctcgaaagtgctcgacagaatcttcggtggctgg
ctgttccgtccgttcaaccgcttcttcgatcgcgccagccatggctacgtcggcaccgtg
cgccgggtcatccgtagcagcggcatcgccctgctcgtatatgcaggcctgatggtactg
accttcttcggtttctccagcacgccgaccggtttcgtacctggccaggacaaacaatac
ctggtggcgttcgcgcaattgccggatgccgcgagcctggatcgcaccgaagacgtgatc
aagcgcatgtctgacctcgcgctgaaacagccgggcgtggaaagcgccgtagcgttcccg
ggcctgtcgatcaacggcttcaccaacagcccgaacgccggcatcgtcttcgtgacgctg
aaaccgttcgacgagcgtaaagacccgagcatgtccgccggcgcgattgccggcgccttg
aacggccagtacgcgaacattcaggaagcgtacatggcgatcttcccgccaccgccggta
caaggtctgggcaccattggtggtttccgcctgcaaatcgaagaccggggcaacctgggc
tacgacgagctgtacaaagaaaccatgaacatcatcaacaaaagccacaacgtgccggaa
ctggccggcctgttcaccagctacacggtgaacgtgccgcaggtcgatgccgccatcgac
cgtgaaaaagccaagacccacggcgtggccgtcagcgacatcttcgacaccctgcagatc
tacctgggttcgctgtatgccaacgacttcaaccgcttcgggcgcacctatcaggtcaac
gttcaggctgaacagcagttccgtcttgaatccgatcagattggtcagctgaaagtacgc
aacaacaaaggcgaaatgatcccgctggcgaccttcatcaaggtcagcgacacctcgggg
ccggatcgcgtgatgcactacaacggcttcatcaccgctgaaatcaacggtgccgcagcc
ccgggctacagctctggccaggcggaaaaagccatcgagaaactactcaaggaagaactt
ccgaacggcatgacctatgagtggaccgacctgacctaccagcagattctgtccggcaac
accgcgctgttcgtgttcccgctctgcgtactgctggcgttcctggtgctcgccgcccaa
tacgaaagctggagcctgccactggcggtgatcctgatcgtaccgatgacgctgctgtcg
gccatcaccggtgtgatcatttccggcggtgacaacaacatcttcacccagatcggcttg
atcgtactggtgggacttgcctgtaaaaacgcgattctgatcgtcgagttcgccaaggat
aaacaggaagaaggcctcgatccgctcgctgcggtgctggaagcctgccgcctgcgtctg
cggccgatcctgatgacctccttcgcgttcatcatgggtgtggtgccactggtgttctcc
agcggcgccggtgccgaaatgcgtcacgccatgggtgtcgcggtgttctccgggatgctc
ggggtgaccttcttcggtctgctgctgacgccagtgttctatgtactgatccgtaacttt
gtcgaacgcggcgagcagcgcaaagcagccaaggcgcacactcttcaaaagccactggag
gcgcaacaatga
DBGET
integrated database retrieval system
