Pseudomonas siliginis: NF676_22240
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Entry
NF676_22240 CDS
T08569
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
psii
Pseudomonas siliginis
Pathway
psii00540
Lipopolysaccharide biosynthesis
psii01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NF676_22240 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
psii01005
]
NF676_22240 (lpxC)
Enzymes [BR:
psii01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
NF676_22240 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
psii01005
]
Lipid A
NF676_22240 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
UST78853
LinkDB
All DBs
Position
complement(4856482..4857393)
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AA seq
303 aa
AA seq
DB search
MIKQRTLKNIIRATGVGLHSGEKVYLTLKPAPVDTGIVFCRADLDPVVQIPARAENVGET
TMSTTLINGDVKVDTVEHLLSAMAGLGIDNAYVELSASEVPIMDGSAGPFVFLIQSAGLE
EQDAAKKFIRILREVTVEDGDKRATFVPFEGFKVSFEIDFDHPVFRDRTQSASVDFSSTS
FVKEVSRARTFGFMSDIEYLRKHNLALGGSVENAIVVDADGVLNEDGLRYEDEFVKHKIL
DAIGDLYLLGNSLIGEFKGFKSGHALNNQLLRKLIEQTDAWEVVTFEDASTAPISYMRPV
AAV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaacgcacactgaaaaatattatccgtgccacaggtgtaggcctgcattcc
ggcgagaaggtctatctgaccctcaagcctgcgcctgtcgacactggcattgtgttttgt
cgcgctgacctcgaccctgtggtgcagattcctgcccgcgcggaaaacgtcggtgaaacc
actatgtcgacgacgctgatcaatggcgacgtcaaagtggacacggtagagcacttgctc
tcggccatggctggcctgggcatcgataacgcctacgtcgagctctccgcgtccgaagtc
ccgatcatggatggcagcgctggacccttcgtattcctgattcaatcggcaggcctggaa
gaacaggacgccgccaagaaattcatccgcatcctgcgtgaagtgacagtggaagacggc
gacaagcgcgccactttcgtccctttcgaaggcttcaaggtgagcttcgagatcgatttc
gatcacccggtattccgggaccgcacccagagtgcaagcgtggatttttccagcacttcg
ttcgtaaaagaagtcagccgcgcccgtacctttggtttcatgagtgacatcgagtacctg
cgcaagcacaacctcgcactcggcggcagcgtggaaaacgcgatcgtggtcgacgctgat
ggcgtgttgaacgaagacggtcttcgttatgaagacgaattcgtcaaacacaagatcctc
gacgcgattggcgacctgtacctgctgggcaacagcctgattggtgagttcaaaggcttc
aagtccggtcatgcactgaacaaccagctgctgcgcaaattgattgagcagacagatgct
tgggaagtggtgacgttcgaagacgccagcacagcaccgatctcttacatgcgcccggtt
gcggcggtgtaa
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