Phocoena sinus (vaquita): 116738709
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Entry
116738709 CDS
T07759
Symbol
EXTL1
Name
(RefSeq) exostosin-like 1 isoform X1
KO
K02368
alpha-1,4-N-acetylglucosaminyltransferase EXTL1 [EC:
2.4.1.224
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
psiu01100
Metabolic pathways
Module
psiu_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
116738709 (EXTL1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psiu01003
]
116738709 (EXTL1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
116738709 (EXTL1)
Glycosyltransferases [BR:
psiu01003
]
Glycan extension
O-Glycan
116738709 (EXTL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
116738709
NCBI-ProteinID:
XP_032479157
Ensembl:
ENSPSNG00000002094
UniProt:
A0A8C9B6H0
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All DBs
Position
1:20469100..20481841
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AA seq
675 aa
AA seq
DB search
MQSWRRKSLWLALLASWLLILLGLFPLLRLAVPTSPRAGAPQGWPRWLDTELLQSFAKPG
ELLEDGPRPPQALRGGSCNWGACFDTSKCRGGGLKVFVYPAAGPVSETRRRILASVEGSR
YHTLSAAEACLLLLLSPDTSTGERDPVPPQWDGGRNHLVLSLHPAPCPRTFQLGQAMVAE
ASPTVDTFRPGFDVALPLLPEAHPLRGGAPGQLRQHSPRPGVALLALAEDGGRWHVAGTD
FSACPWDGRCEQDRGPKQTHPGATLPNATFCLIPGRGPDVLHFLQALQAGCIPVLLSPRW
ELPFSEVIDWTKAAIVADERLPLQVLTALQEMPLTRVLALRQQTQFLWDAYFSSVEKVIH
TTLEIIQDRIFGPSAHPSLLWNSPPGAILALPTFSPSPSDFPFYHLQQGSRPLGRFSALI
WGGALGQPPLKLIQAVAGSEHCAQILVLWSSEKPPPTRWPKTAVPLTVIDGHRKVSDRFF
PYSAISTDAILSLDAHSSLSTSEVDFAFVVWQSFPERMVGFLTWSHFWDEARGGWGYTAK
RTNEFSMVLTSAAFYHRYYHTLFTHALPKALRTLADEAPTCVDVLMNFLVASVTKLPPIK
VPYGMWHQEARPPPLEPGGPGLRQEPQPAAQNCINQMAAGFGHMPLVSSRLRLDPVLFKD
PVSVLRKKYRSLEKP
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgtggagacggaagtccctctggctggcactgttggcctcctggctcctcatc
ctgctgggactcttcccccttctccgcctggcagtgcccaccagcccccgggcaggagcc
ccccaaggctggccccgctggctggacacagagctcctgcagagtttcgccaagcctggg
gagctcctggaagatggccctcgacctcctcaagccctccgtggtggcagctgcaactgg
ggagcttgctttgacacctcgaaatgcagaggtggtggcctcaaggtattcgtgtaccca
gcggctggacccgtctctgagactcgccgcaggatcctggcttccgtcgagggctcccgc
taccacacgctcagcgctgctgaggcctgcctcctcctcctcctcagcccggacacctcc
actggagagcgcgacccggtgcccccgcagtgggatgggggcaggaaccacctggtcctc
agtctccacccagccccttgcccccggaccttccagctgggacaggcgatggtggccgag
gccagtcccacagtggacacctttcggcccggctttgacgtggccctcccgcttctccct
gaagcccacccgttgcgaggtggagcacctggccagctgcggcaacacagcccccgcccc
ggggtggccctgctagccctggcagaggacgggggcaggtggcacgtggcaggcactgac
ttctctgcctgcccctgggatgggcgctgtgaacaggaccgtggacccaagcagacccac
cctggggcaacgctacctaacgccaccttctgcctcatccctggccgcggtcctgatgtc
ttacacttccttcaagccctgcaggctggctgcatccctgtgcttctcagccctcgctgg
gagctgcccttctctgaggtcatcgattggaccaaggcggccattgtagctgacgagagg
ctcccacttcaggtcctgactgccctccaggagatgcccctcacacgggtccttgccctg
cgtcagcagacccagtttctatgggatgcctacttctcctcggtggagaaggtcatccat
accactctggagattattcaggaccggatcttcggaccctctgctcacccctcgctacta
tggaacagccctccaggggcaatcctggccctgcccactttctccccaagcccctcggac
ttccccttctaccacctgcaacagggctctcgtcctctgggcaggttcagcgccctgatt
tgggggggggctctaggccagccccccctgaagctcatccaggctgtggcaggctccgag
cactgtgcccagatcttggttctctggagcagtgagaagccacccccaaccaggtggccc
aagacagcagtgcccttgacagtcattgatgggcacaggaaggtcagtgaccgcttcttc
ccgtacagtgccatcagcaccgatgccatcctcagcctggatgcccatagcagtctttcc
acaagtgaggtggacttcgcttttgtggtgtggcagagcttcccagagcggatggtcggc
tttctgacgtggagccacttctgggatgaagcccgtggtggctggggctacactgccaag
aggaccaacgaattctccatggttctcacctcggctgccttctaccataggtattaccac
accctcttcacccacgccctgcccaaggctctgaggaccctggcagatgaggcacccacc
tgtgtggatgtcctgatgaacttcctagtagcatccgtcaccaagttgccccctatcaag
gtgccctatgggatgtggcatcaggaggccagacctcctccactggagcctgggggtccg
gggctcaggcaggagccgcagcccgcagcccagaactgcatcaaccagatggcggcaggg
ttcggccacatgcccctggtatcttctcgcctccgtctggaccccgtgctcttcaaggac
ccggtgtccgtgctgcgtaagaagtatcgcagcctggagaaaccctag
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