Phocoena sinus (vaquita): 116739240
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Entry
116739240 CDS
T07759
Symbol
DSEL
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
psiu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
116739240 (DSEL)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
116739240 (DSEL)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
DUF4962
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
116739240
NCBI-ProteinID:
XP_032459366
Ensembl:
ENSPSNG00000017875
LinkDB
All DBs
Position
14:9449377..9458710
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AA seq
1212 aa
AA seq
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MALMFTGHFLFLLLVMFAFSTFEESVSNYSDWAVFPDDIDQLKTQKVQDFRPNQKLKKSM
LHPHLYFDAGEIQAMRQKSRTSHLHLFRAIRSAVMVMLSNPTYYLPPPKHADFAAKWNEI
YGNNLPPLALYCLLCPEDKVAFEFVLEYMDRMVGYKDWLVENAPGDEVPVGHSLTGFATA
FDFLYNLLDDHRRQKYLEKIWVITEEMYEYSKVRSWGKQLLHNHQATNMIALLTGALVTG
VDKGSKVNLWKQVVVDVMEKMMFLLNHIVDGTLDEGVAYGSYTAKSVTQYVFLAQRHFNI
NNLDNNWLKMHFWFYYATLLPGFQRTVGIADSNYNWFYGPESQLVFLDKFVLKNGAGNWL
AQQIRRHRPKDGPMVPSTAQRWSTLHTEYIWYDPQLTPRPPAEYGTAKMHTFPNWGVVTY
GAGLPNTQTNTFVSFKSGKLGGRAVYDIVHFQPYSWIDGWRSFNPGHEHPDQNSFTFAPN
GQVFVSEALYGPKLSHLNNVLVFAPSPTSQCNKPWEGQLGECAQWLKWTGEEVGDAAGEI
ITASQHGDMVFVSGEAVSAYSSAMKLKSVYRALLLLNSQTLLVVDHVERQEDSPIKSVSA
FFHNLDIDFKYIPYRFMNRYNGAMMDVWDAHYKMFWFDHRGSSPIASIQEAEQAAEFKKR
WTQFVNVTFQMESTITRIVYVFYGPYVNLSSCRFIDNSNSGLQISLNVNNTEHVVSIVTD
YHNLKTRFDYLGFGGFASVADQVQITRFGLGTQAIVKPVRRDRVIFPFGFKFNVAVGLIL
CISLVTLTFQWRFYLSFRKLMRWILTLVIALWFVELVDVWSTCTQPICAKWARPEAEASP
KPVSPQGHRIDLPDIVITSLPGSGAEILKQLFFNSSDFLYIRVPTAYIDIPETDFEIDSF
VDACEWKASDVHGVHFRLLRGWLQSLVQDTKLHLQNIHLHEPGRGKLAQYFTTNKDKKRK
LKRRESLPEQRSRMKGAFDRDAEYIRALRRHLVHYPSARPVLSLNSGSWTLKLHFFHEVL
GASMRALYVVRDPRAWIYSMLYSSKPSLYSLKNVPEHLAKLFKIEGGKGKCNLNSGYASE
YESLRKELSKSKPHAVSLLAHVWLANTAAALRINTDLLPTSYQMIKFEDIVHFPQKTTER
IFAFLGIPLSPASLNQILFATSTNLFYLPYEGEISPTNTNVWKQNLPRDEIKLIENICWT
LMDRLGYPKFMD
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaatgtttacaggacatttcttatttttactgttagtgatgtttgctttctct
acttttgaagaatctgtgagcaattactctgactgggcagttttcccagacgacatagat
cagcttaagacacagaaagtgcaagatttcagacccaaccaaaagctgaagaaaagtatg
cttcatccacatttatattttgatgctggagagatccaagcaatgaggcaaaagtctcgc
acaagccatttgcatctttttagagctatcagaagtgcagtgatggttatgctgtccaac
ccgacatactacctacctccacccaagcatgctgattttgctgccaagtggaatgaaatt
tatggtaacaatctgccccctttagcactgtactgtttgttatgcccggaagacaaagtt
gcctttgaatttgttttggaatatatggacaggatggtgggctacaaagactggctggtg
gagaatgcaccaggggatgaggttccagttggccattccttaacaggttttgccactgcc
tttgactttttatataacttattagatgatcatcgaaggcaaaaatacctagaaaaaata
tgggttattactgaggaaatgtacgagtattccaaggtccgctcatggggcaaacaactt
cttcataaccaccaagctactaatatgatagcgttactcactggggcgttggtgactggg
gtggataaaggatctaaagtaaatctatggaaacaggttgtagtagatgtgatggaaaag
atgatgtttctgttgaatcatattgtcgatggtactttggatgaaggtgttgcctatgga
agctacacggctaagtcagtcacacagtacgtttttctggcccagcgccattttaatatc
aacaacttggataataactggttaaaaatgcacttttggttctattacgccaccctcttg
ccaggcttccaaagaactgtgggtatagcagattccaattataattggttttatggtccc
gagagccagttagtttttttggataagttcgtcttaaagaatggagctggaaattggtta
gctcagcaaatcagaaggcaccggcctaaagatggaccaatggtcccctccactgcccag
aggtggagtactcttcacactgaatacatctggtatgatccccagctcaccccacggcct
cctgcagaatatggtactgcaaaaatgcacacgttccctaactggggtgttgtcacttat
ggggctgggttgccaaacacacagaccaatacctttgtgtcttttaaatctgggaagcta
ggagggcgagctgtctatgacatagttcacttccagccatactcctggattgatgggtgg
agaagctttaacccaggacatgaacatccagatcagaactcattcacttttgcccccaat
gggcaggtatttgtttccgaagctctctatggacccaagttgagccaccttaacaacgta
ctggtgtttgcgccatcacccacaagccaatgtaataagccctgggaaggtcagctggga
gaatgtgcacagtggcttaagtggaccggcgaggaggttggtgatgcagcgggggaaatc
attactgcctctcaacatggggacatggtatttgtaagcggggaagcagtgtcagcttat
tcctcagcaatgaagctgaaaagtgtgtatcgggctttgcttctcttaaactctcagact
ctgctagtggttgatcacgtcgagaggcaagaagattccccaataaaatctgtcagtgcc
ttcttccataatctggatattgactttaagtacatcccatataggttcatgaacaggtat
aacggtgccatgatggatgtgtgggatgcacattacaaaatgttttggtttgatcatcgt
ggcagtagccccattgctagtatacaggaagcagagcaagcagctgaatttaagaaacgg
tggactcaatttgttaatgttacatttcagatggaatccacaatcacaagaatcgtatat
gtcttttatgggccatatgtcaatctttccagctgcagatttattgataattccaattct
ggacttcagatttctctcaatgtcaataatactgaacacgttgtttccattgtaactgac
taccacaacttgaaaacaaggttcgattacctgggatttggtggctttgccagtgtggct
gatcaggtccaaataacccgatttggtttgggcactcaagccatagtgaagcccgtaaga
cgtgacagagtgatttttccctttggatttaaatttaatgtagcagttgggttgattttg
tgcatcagcttggtgaccttaacttttcagtggcggttttacctttcttttagaaagcta
atgcggtggatcctcacccttgttattgccttgtggttcgttgagctggtggatgtgtgg
agcacttgcactcagcccatctgtgcaaagtgggcgaggccggaggccgaagcgagccca
aagcctgtgtctccccaagggcaccgcatcgatcttcctgacatcgtcattacctcactt
cctggctcaggagctgaaattctcaaacaactcttcttcaacagcagtgactttctctac
atcagggttcccacagcctacattgacatccctgaaactgactttgagatcgactccttt
gtggatgcctgtgaatggaaggcgtcggatgtccatggtgtgcatttccgtttactccga
ggctggttgcagtccttggtccaagacacaaaactccatttgcaaaacatccatctgcac
gaacccggcaggggtaaactggcccaatattttaccacgaataaggacaaaaaaaggaag
ttgaaaaggagagagtctttgccagaacaaagaagcagaatgaaaggcgcctttgataga
gacgctgaatacattcgggctctgaggagacacctggtccattaccccagcgcgcggccc
gtgctcagcctgaacagtgggagctggaccttaaagctgcatttcttccacgaagtttta
ggagcttcgatgagggccttgtatgtggtgagggaccctcgggcgtggatttattcgatg
ctgtacagtagtaaaccaagtctttactctttgaagaatgtaccagagcacttagctaaa
ttgtttaaaatagagggaggtaaaggcaaatgtaacttaaattcgggctatgcttccgag
tatgaatcattgaggaaagaattatcaaaatccaagccacacgcagtgtctctgctggct
cacgtgtggctagcaaacactgcagcagccttgaggataaacacagacctgctgcctacc
agctaccagatgatcaagtttgaagatattgtgcattttcctcagaaaaccactgaaagg
atttttgcctttcttggaattcctttgtctcctgctagtttaaaccaaatattgtttgcc
acctccacgaaccttttctatcttccctatgaaggggaaatatcaccaactaatactaat
gtttggaaacagaacttgcctagagatgaaattaaactgattgaaaacatctgctggaca
ctgatggatcgtctaggatatccaaagtttatggactaa
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integrated database retrieval system
