Phocoena sinus (vaquita): 116739866
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Entry
116739866 CDS
T07759
Symbol
PLOD3
Name
(RefSeq) multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 isoform X1
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00310
Lysine degradation
psiu00514
Other types of O-glycan biosynthesis
psiu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116739866 (PLOD3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116739866 (PLOD3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psiu01003
]
116739866 (PLOD3)
Enzymes [BR:
psiu01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
116739866 (PLOD3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
116739866 (PLOD3)
2.4.1.66 procollagen glucosyltransferase
116739866 (PLOD3)
Glycosyltransferases [BR:
psiu01003
]
O-Glycan biosynthesis
O-linked Gal type
116739866 (PLOD3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GT_PLOD
Glyco_tranf_2_4
2OG-FeII_Oxy
OGFOD2-like
2OG-FeII_Oxy_3
DjlB_C_2nd
Motif
Other DBs
NCBI-GeneID:
116739866
NCBI-ProteinID:
XP_032460569
Ensembl:
ENSPSNG00000007334
LinkDB
All DBs
Position
15:80926845..80934522
Genome browser
AA seq
749 aa
AA seq
DB search
MASGPGLRLLLLLLLLLSPPPEASASNRPRGSDPVNPEKLLVITVATGETEGYRRFLRSA
EFFNYTVRTLGLGQEWRGGDVARTVGGGQKVRWLKKEMEKYADREDMVIMFVDSYDVILA
GSPSELLKKFVQSGSRLLFSAEGFCWPEWGLAEQYPEVGTGKRFLNSGGFIGFAPAIHQI
VRQWKYKDDDDDQLFYTRLYLDPGLREKLSLNLDHKSQIFQNLNGALDEVVLKFGRNRVR
IRNVAYDTLPVVVHGNGPTKLQLNYLGNYVPNGWTPEGGCGFCDQDRRPLPGGQTPPRVL
LAVFVEQPTPFLPRFLQRLLLLDYPPDRVTLFLHNNEVYHEPHIADSWPQLQDHFSAVKL
VGPEEGLTPGEARDMAISSVCWSVTSRDTCRQDPKCEFYFSLDADAVISNPQTLRILIEE
NRKVIAPMLSRHGKLWSNFWGALSPDEYYARSEDYVELVQRKRAGVWNVPYISQAYVIRG
ETLRTELPQREVFSGSDTDPDMAFCKSLRDKGIFLHLSNQHEFGRLLATSRYDTDHLHPD
LWQIFDNPLDWKEQYIHENYSRALEGEGLVEQPCPDVYWFPLLSEQMCDELVEETEHYGQ
WSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLLRTYVGPMTESLFPGYHTKTRAV
MNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKGLDYEGGGCRFLRYDCVVSSPRKGWGL
LHPGRLTHYHEGLPTTRGTRYIMVSFVDP
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggcccgggactccggctcctgctgctactgctgctactgctgtcgccgcct
cctgaggcctcggcttcaaatcgtccccggggcagcgaccctgtcaacccagagaagctg
ctggtgatcaccgtggccacaggcgagacagaaggataccggcgtttcctgcggtcagcg
gagtttttcaactacactgtgcggaccctgggcctgggacaggagtggcgagggggcgat
gtagcccgaacggttggtggaggacagaaggtcaggtggctgaagaaggaaatggagaaa
tatgcagacagggaggatatggtcatcatgtttgtggacagctacgacgtgattctggcc
ggcagcccctcggagctgctgaagaagtttgtccagagtggcagccgtctgctcttctct
gcagagggcttctgctggcccgagtgggggctggcggagcagtaccctgaggtgggcacg
gggaagcgcttcctcaactctggtggattcattggcttcgcccctgctatccaccaaatt
gtccgccagtggaagtacaaagatgacgatgacgatcagctgttctacactcggctctac
ctggacccaggactgagggagaaactcagccttaatctggatcataaatcgcagatcttt
cagaacctcaacggggctttagatgaggtggtcttaaagtttggtcggaatcgcgtgcgt
atccggaatgtggcctatgacacacttcctgttgtggtccatgggaacggccccactaag
ctccagctgaattacctgggaaactacgtccccaatggctggactcctgagggaggctgt
gggttctgtgaccaggaccggaggccactcccgggggggcagactcccccccgggtgctt
ctggcagtgtttgtggaacaacctaccccattcctgccccgcttcctccagcggctgctg
ctcctggactatccgcccgacagggtcaccctcttcctgcacaacaacgaggtgtaccac
gagccccacattgctgactcctggccccagctgcaggaccacttctcagctgtgaagctg
gtggggcccgaggagggcctgacgccaggcgaggccagggacatggccatctcatctgtc
tgttggtctgtcacctccagggacacttgtcggcaggaccccaagtgtgaattctacttc
agcctggacgcagacgcggtcatcagcaacccgcagaccctgcgcatcctcattgaagag
aacaggaaggtgatagcgcccatgctgtcccgccacgggaagctgtggtccaatttctgg
ggagccctgagccccgatgagtactacgcgcgctccgaggactacgtggagctggtgcag
cggaagcgagcgggcgtgtggaatgtgccctacatatcccaggcctatgtgatccgcggg
gagaccctgaggacggagctgccccagagggaggtgttctcgggcagtgacactgaccca
gacatggccttctgcaagagcctgcgggataagggcatctttctccacctcagcaatcag
cacgaatttgggcgcctcctggccacttcccggtatgacacagaccacctgcaccctgac
ctctggcagatcttcgacaaccccctggactggaaggagcagtatattcacgagaactac
agccgggccctggaaggggagggactcgtggaacagccctgcccggacgtgtactggttc
cctctgctgtctgagcaaatgtgcgatgagctggtggaagaaacggagcattacggccag
tggtcaggaggccggcatgaggactcaaggctggctggaggctacgagaacgtacccacc
gtggacatccacatgaagcaggtgggctatgaggaccagtggctgcagctgctgcggacg
tacgtggggcccatgaccgagagcctgttccccggctaccacaccaagacccgggcggtg
atgaactttgtggtccgctaccggccagatgagcagccctctctgcggccacatcacgac
tcatccaccttcaccctcaatgtcgccctcaaccacaagggcctggattatgagggaggt
ggctgccgcttcctgcgctacgactgtgtggtgtcgtccccccggaagggctgggggctc
ctgcaccctggccgcctcacccactaccacgaggggctgcccaccactcggggcactcgc
tacatcatggtgtcctttgtggacccctga
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