Phocoena sinus (vaquita): 116740198
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Entry
116740198 CDS
T07759
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00514
Other types of O-glycan biosynthesis
psiu04330
Notch signaling pathway
psiu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116740198 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116740198 (LFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
116740198 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psiu01003
]
116740198 (LFNG)
Enzymes [BR:
psiu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
116740198 (LFNG)
Glycosyltransferases [BR:
psiu01003
]
Glycan extension
O-Glycan
116740198 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF2785
DUF6895
Motif
Other DBs
NCBI-GeneID:
116740198
NCBI-ProteinID:
XP_032461461
Ensembl:
ENSPSNG00000020032
UniProt:
A0A8C9CPL6
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All DBs
Position
15:complement(86493588..86501855)
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AA seq
378 aa
AA seq
DB search
MLKRCGRRLLLALAGALLACLLVLTADPPPPPVPAERGRRALRSLAGPSGAAPAPGLEAA
AAPGVLVREVHSLSEYFSLLTRSRRDAGPPPGSVPRPADGHPRPPAEPLTPHDVFIAVKT
TKKFHRARLDLLLETWISRHKEMTYIFTDGEDEALARRTGNVVNTNCSAAHSRQALSCKM
AVEYDRFVESGRKWFCHVDDDNYVNVRALLKLLASYPHTQDIYLGKPSLDRPIQATERVS
ESKVRPVHFWFATGGAGFCISRGLALKMSPWASGGHFMSTAERIRLPDDCTIGYIVEALL
GVPLIRSGLFHSHLENLQQVPTSELHEQVTLSYGMFENKRNAVHIKGPFSVEADPSRFRS
IHCHLYPDTPWCPHTAIF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcgctgcggccgtcgcctgctgctggcgctggcgggcgcgctgctcgcctgc
ctgttggtgctcacggccgacccgccgccgcccccggtgcccgctgagcgcggtcggcgc
gcgctgcgcagcctggcgggcccctcgggggcggccccagctcctgggctggaggcggcg
gcggcacccggggtgctagtccgcgaggtgcacagtctgtccgagtacttcagcctgctg
acccgctctcgtagagacgcgggcccaccgcccggcagcgtcccccgccccgcagacggc
catccgcggcccccggccgagccactcacgccgcacgacgtcttcatcgcggtcaagacc
accaaaaagtttcaccgcgcgcgcctcgacttgctgctggagacgtggatctcgcgccac
aaggagatgacgtacattttcacggacggggaagatgaagccctggccaggcgcacgggc
aacgtggtcaatactaactgctcggctgcccacagccgccaggcactgtcctgcaagatg
gccgtggagtatgaccgcttcgtcgaatcggggaggaagtggttctgccacgtggatgat
gataactacgtgaacgtgcgggccttgctgaagctgctggccagctacccgcacacgcag
gacatctacctcggcaagcccagcctggacaggcccatccaggccacagagagggtcagc
gagagcaaggtgcggcccgtccacttctggtttgccaccggcggggctggcttctgcatc
agccgggggctggccctgaagatgagcccttgggccagcggaggccacttcatgagcacg
gccgagcggatccggctgccggacgactgcaccatcggctacatcgtggaggctctgctg
ggcgtgcccctcatccgcagcgggctcttccactcccacctggagaacctgcagcaggtc
cccacctccgagctccacgagcaggtgaccttgagctacggcatgtttgaaaacaagcgg
aatgctgtccacattaaggggcccttctcagtggaggccgacccatccaggttccgctcc
atccactgccacctgtatccggacacaccctggtgtccccacactgccatcttctag
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