Phocoena sinus (vaquita): 116740665
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Entry
116740665 CDS
T07759
Symbol
EDEM2
Name
(RefSeq) ER degradation-enhancing alpha-mannosidase-like protein 2 isoform X1
KO
K10085
ER degradation enhancer, mannosidase alpha-like 2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116740665 (EDEM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
psiu04091
]
116740665 (EDEM2)
Lectins [BR:
psiu04091
]
M-type lectins
116740665 (EDEM2)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_47
Motif
Other DBs
NCBI-GeneID:
116740665
NCBI-ProteinID:
XP_032462357
Ensembl:
ENSPSNG00000011589
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Position
15:24103514..24134690
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AA seq
593 aa
AA seq
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MPFRLLVPFGLLCALLPLHHGAPGPDGTAPDPAHYRARVKAMFYHAYDSYLENAFPYDEL
RPLTCDGHDTWGSFSLTLIDALDTLLILGNVSEFQRVVEVLQDNVDFDIDVNASVFETNI
RDPNFMEGSSIRLPTLVVGGLLSAHLLSKRAGVEVEAGWPCSGPLLRMAEEAARKLLPAF
QTPTGMPYGTVNLLHGVNPGETPVTCTAGIGTFIVEFATLSSLTGDPVFEDVARVALMRL
WESRSDIGLVGNHIDVLTGKWVAQDAGIGAGVDSYFEYLVKGAILLQDKKLMAMFLEYNK
AIRNYTRFDDWYLWVQMYKGTVSMPVFQSLEAYWPGLQTLIGDIDNAMRTFLNYYTVWKQ
FGGLPEFYNIPQGYTVEKREGYPLRPELIESAMYLYRATGDPTLLELGRDAVESIEKISK
VECGFATIKDLRDHKLDNRMESFFLAETVKYLYLLFDPTNFIHNNGSTFDAVITPYGECI
LGAGGYIFNTEAHPIDPAALHCCRRLKEEQWEVEDLMREFYSLKRNRSRFQKKTMSSGPW
EPPTGPGTLSSPENYDRAREKKPTKQKISLLSCPSQPFTSKLALLGQVFLDSS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcctttccggctgctcgtcccgtttggcctcctgtgtgcgctgctacccctgcaccat
ggtgcgcccggcccggatggcaccgcgcccgaccccgcccactacagggcgcgagtcaag
gccatgttctaccacgcctacgacagctacctggagaatgcctttccctacgacgagctg
cgacctctcacctgtgacgggcacgacacttggggcagtttttctctgactcttattgat
gctctggacaccttgttgattttggggaatgtctcagaattccaaagagtggttgaagtg
ctccaggacaacgtggactttgatattgatgtgaacgcctctgtgtttgaaaccaacatc
cgagatcccaacttcatggagggatcttctatcagacttcccactctggtagtaggagga
cttctgtctgctcacctgctatcaaagagggctggggtagaagtggaggctggatggccc
tgctcgggacctctcctgaggatggctgaggaggcagcccggaaactcctcccagccttt
cagacccccactggcatgccgtatggaacggtgaacctgcttcatggcgtgaacccagga
gagactcctgtcacctgcacagcagggatcgggaccttcatcgtggaatttgccaccctg
agcagcctcaccggtgaccctgtgttcgaagacgtggccagagtggccctgatgcgcctc
tgggagagccggtcagatattgggctggtcggcaaccacatcgatgtgctcactggcaag
tgggtggcccaggacgcgggcattggggctggcgtggactcctactttgagtacctggta
aaaggagccatcctgcttcaggataagaagctcatggccatgttcctagaatataacaaa
gccattcggaattacacccgcttcgatgactggtacctgtgggtgcagatgtacaagggg
actgtgtccatgccagtcttccagtctctggaggcctactggcctggtcttcagaccctc
attggggacattgacaatgccatgaggaccttcctcaactactacaccgtctggaagcag
tttggggggctcccggaattctacaacattcctcagggatatacagtggagaagcgagag
ggttacccgcttcgaccagaactcattgagagcgccatgtacctctaccgtgccacgggg
gaccccaccctcttagaactcggaagagatgctgtggaatccatcgaaaaaatcagcaag
gtggaatgtggatttgccacaatcaaagatctgcgagaccacaagcttgacaaccgcatg
gagtctttcttcctggccgagaccgtgaaatacctctacctgctgtttgacccgaccaac
ttcatccacaacaatggctccaccttcgatgcggtgataaccccctacggggagtgcatc
ctgggggccgggggttacatcttcaacactgaagcacaccccattgaccccgccgccctg
cactgttgccggaggctgaaggaagagcagtgggaagtagaagatctgatgagggaattc
tactctctcaaacggaataggtcgagatttcagaaaaaaactatgagctcagggccatgg
gaacccccaacagggccagggacattgtcctcccctgaaaactatgaccgggcaagggag
aagaagcccaccaagcagaaaatctcacttctcagctgccctagtcagccctttacctca
aagttggcattactgggacaggttttcctagattcctcataa
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