Phocoena sinus (vaquita): 116741689
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Entry
116741689 CDS
T07759
Symbol
LGI1
Name
(RefSeq) leucine-rich glioma-inactivated protein 1 isoform X1
KO
K25428
leucine-rich repeat LGI family member 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
116741689 (LGI1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRRCT
LRR_9
LRR_14
DUF7448
VWC2L_1st
Motif
Other DBs
NCBI-GeneID:
116741689
NCBI-ProteinID:
XP_032464509
Ensembl:
ENSPSNG00000013158
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Position
16:51951038..51984685
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AA seq
617 aa
AA seq
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MQVRSLLEQLDPSHLAAPHRSLPRAVHRWSEEQLTNQLQVPVLKSRETEAEEKGGLLCDL
VLKQDNHHLNSRSPVHVWGYFFDCMESERSQRMGNACNPLKRIAYCLCLLSALLLTEGKK
PAKPKCPAVCTCTKDNALCENARSIPRTVPPDVISLLFTSNSFDVISDDAFIGLPHLEYL
FIENNNIKSISRHTFRGLKSLIHLSLANNNLQTLPKDIFKGLDSLTNVDLRGNSFNCDCK
LKWLVEWLGHTNATVEDIYCEGPPEYKKRKINSLSSKDFDCIITEFAKSQDLPFQSLSID
TFSYMNDEYVVIAQPFTGKCIFLEWDHVEKTFRNYDNITGTSTVVCKPIVIETQLYVIVA
QLFGGSHIYKRDSFANKFIKIQDIEILKIRKPNDIETFKIENNWYFVVADSSKAGFTTIY
KWNGNGFYSHQSLHAWYRDTDVEYLEIARTPQTLRTPHLILSSSSQRPVIYQWNKAIQLF
TNQTDIPNMEDVYAVKHFSVKGDVYICLTRFIGDSKVMKWGGSSFQDIQRMPSRGSMVFQ
PLQINNYQYAILGSDYSFTQVYNWDAEKAKFVKFQELNVQAPRSFTHVSINKRNFLFASS
FKGNTQIYKHVIVDLSA
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtccgctctctcctcgagcagttggatccctcccatctcgcagcacctcacagg
tctcttccccgagcagtgcatcgctggagcgaggagcagctcacgaatcagctgcaggtc
cctgttttgaaaagcagagagacagaggcagaggaaaagggtggactcttatgtgacctg
gtcttaaagcaagacaatcaccatctgaattccagaagccctgttcatgtttggggatat
tttttcgactgcatggaatcagagagaagccaaaggatgggaaatgcctgcaaccccctg
aaaagaattgcttattgcctatgtctcttatctgcgcttttgctgactgaggggaagaaa
ccagcgaagccaaaatgccctgccgtgtgtacttgtaccaaagataatgctttatgtgag
aatgccagatccattccacgcaccgttcctcctgacgttatctcattgttattcacatcg
aactcatttgatgtgatcagtgatgatgcttttattggtctcccacatctagagtattta
ttcatagaaaacaacaacatcaagtccatttcaagacatactttccggggactaaagtct
ttaattcacctgagccttgcaaacaacaacctccagactctcccaaaagacattttcaaa
ggcctggattctttaacaaatgtggacctgagaggtaattcatttaattgtgactgtaaa
ctgaagtggctggtggaatggctaggccacaccaatgcaactgtcgaagacatctactgt
gaaggccctccagaatacaagaagcgcaaaatcaatagtctctcctccaaggattttgat
tgcatcattacagagtttgcaaagtctcaagacctgccttttcaatcactgtccatagac
actttttcttacatgaacgatgagtatgtagtcatcgctcagcctttcactggaaagtgc
attttccttgaatgggaccacgtagaaaagaccttccggaattatgacaacattacaggc
acgtccactgtagtgtgcaagcctatagtcattgaaactcagctctatgttattgtggcc
cagctgttcggtggctctcacatctataagagagacagttttgcaaataaattcataaaa
atccaggatattgaaattctcaaaatccgaaaacccaatgacattgaaacgttcaagatt
gaaaacaactggtactttgtggttgctgacagttcaaaagctggttttactaccatttat
aaatggaacggaaatggattctactcccatcaatctttacatgcgtggtacagggatact
gatgtggaatatctagaaatagccagaacacctcagacactcagaacgcctcatttaatc
ctgtccagtagttcccagcgtcctgtaatttatcagtggaacaaagcaatacaattattt
actaaccaaaccgacattcctaacatggaagatgtatatgccgttaagcacttctcagtg
aaaggtgacgtgtacatttgcttgacaagattcattggtgattccaaagtaatgaaatgg
ggaggctcctcatttcaggatattcagaggatgccatcgcgaggatccatggtgttccag
cctcttcagataaataactatcaatacgcaattcttggaagtgattattcctttactcaa
gtgtataactgggatgcagagaaagccaaatttgtaaaatttcaggaattgaatgttcag
gcaccaagatcattcacgcatgtgtccattaataagcgtaattttctttttgcttccagt
tttaagggaaacacacagatttacaaacatgtcatagttgacttaagcgcatga
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