Phocoena sinus (vaquita): 116742007
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Entry
116742007 CDS
T07759
Symbol
HPS6
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116742007 (HPS6)
Membrane trafficking [BR:
psiu04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
116742007 (HPS6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
116742007
NCBI-ProteinID:
XP_032465140
Ensembl:
ENSPSNG00000016490
UniProt:
A0A8C9CD37
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Position
16:58529143..58531897
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AA seq
803 aa
AA seq
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MKRAGTLRLLSDLNNFSGAARLRELLAGDPAVRVRCSPDGRHLLLLRPPGAPGPQLLVAV
RGPGAELERAWPAGQPSPLDAFFLPWPARPALVLVWESGLAEVWGTGVGPGWRLLQSTEL
CTGGGARVVAVAAPRGRLVWCEERQAGAEGREGPPAVAFSHCVCVRTLEPSGEAGTNLGR
THILLHNCPRFGLLTSRKDLFLVPTATTWPGVGHILLIWSPSKGKVVVAAPCLGLSHSKS
LNPGGGDPWDFRTLLRGLPGLLSPRQPLTVHTWAPTPQGLLWLDFRGTVSLVQPHGGTRA
VGTLQEAPASLAGSAALGAFHGTLACVLGSTLELLDMGSGQLLERKVLSTDRVHLLEPPA
PGMENEEELETRGGLRLLSAVGLFRVGWEAPQGLELPSAEDLVFEEACEYYQRRSLRGAR
LTPEELRHNSTFRAPQALASILQGHVSPSTLLTTLRAELRDYRGLEQLKAQLVAGDDEEA
GWTELAEHEVARLLRTELMGDQLAQLNTVFQALPTAAWGAILRALQLQPDGNGRLRSQAP
PDVWRKVLGVTTGGKEPPSGILPLFELLCRCLCRLEPRWLPPFVELAQQQGGPGWGSGGP
GLPLYRRALEVLGEEGTRPEALELDLLLGSGRPKAVLQAVGQLVQKEEWERALEAGLALS
SSSPLLRSEIFKLLLAEFARHRRLDAHLPLLCRLCPPDLAPTELLLLLRTHLPDELEPPA
PFPEPGAEPPLTVGLLRALLEQTGTQGRPSGPVLSQYEDILWDPGTPPPTPPRGPMSALQ
ASDHPGLEAWAPSGQGLCVTDTS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgcgggaactctgcgcctgctctcggacctgaacaacttcagcggcgcggcc
cggctccgggagttgttggccggggacccagccgtccgagttcgctgcagcccggacggc
cgccacctgctgctgctgcgacctccgggggcaccgggcccgcaactgctggtcgcggtg
cgtggacccggcgcggaactggaacgtgcctggccggctggccagccctcaccgctagac
gccttcttcctaccgtggccggcacgaccggcgctagtcctagtgtgggagagtggccta
gccgaggtgtggggcacgggggtggggcccggctggcggctgctgcagagcaccgagctg
tgtactggcggtggagcccgtgtggtggccgtggcggcgcctcgaggccgcctggtgtgg
tgcgaggagcgtcaggctggcgctgagggccgcgaagggcctcccgcagtggctttcagc
cactgtgtgtgcgtccggaccctggagcccagcggggaggccggcaccaacctgggccgt
acacacatcctgctgcacaactgcccccgtttcgggctgctgacctcccgcaaggacctc
ttcctggtgcccactgccaccacctggcctggcgtgggccacattctgctcatctggagc
ccaagcaagggcaaggtagtggtggctgccccatgtcttggcctctcccacagtaagagc
ctgaatcctggaggaggggacccgtgggacttcaggaccctgctccgaggccttcctggg
ctgctgtcccccaggcaaccattaactgtacacacctgggccccaactccccagggcctg
ctgtggcttgacttcaggggcactgtgagcctggtgcagccccacggtggtacccgggct
gttggcacccttcaggaggcacctgccagcctggcagggtctgcagcactgggcgcattt
catggcactctggcctgtgtgctgggctccacattggaactgctggacatgggcagtggg
cagctgctagaaaggaaggtcctaagtacagatcgagtacatctgctggaacccccagcc
cctggcatggaaaatgaggaagagctggagacccgagggggtcttcgtttgctttcagct
gtgggtctgtttcgagtaggctgggaagccccacaaggccttgagctgccttcagctgaa
gatctggtgtttgaggaggcctgcgagtactaccagcggcggagcctgcggggtgcccgg
ctcaccccagaggaactgcgacacaacagcacattccgggcacctcaggccctggcttcc
atcctccagggccacgtgtccccatcaacactattgaccacactgagagccgagcttcgg
gattaccggggcttagagcagcttaaagcccagctggtggctggggatgatgaggaggct
ggctggactgagctggcagagcacgaagtggcacggctgctgaggactgagttgatggga
gaccagctggcccagctcaacaccgttttccaagccctccctacagcggcctggggtgcc
atcctcagggccctgcagctccagccagatgggaatggcaggctgaggtcccaagctccc
cctgacgtgtggaggaaagtattgggtgttacaacaggtggaaaggagccacccagtggg
atactgcccctctttgaactcctgtgccgatgcctctgccggctggagccacgatggctg
ccaccctttgtggagctggcacagcagcagggcgggcctggctggggatcagggggccca
gggctgcccctctatcgccgagccctggaagtactaggtgaggaggggactaggcctgaa
gcactggagctagacctgctcttgggcagtgggcggcccaaagctgtgctccaagctgtg
gggcagctggtgcaaaaggaagagtgggagcgggctctagaggctggcttggcgctcagc
tcctccagccccctgcttcgaagtgagatcttcaaactgctattggccgaatttgcccgg
caccgccggcttgatgctcacctccccctcctttgccgcctgtgcccaccagacctagct
ccaactgagctcctgcttctactgcggacacacctcccagatgagttggagccccccgcc
ccattccctgagcctggggcagagccccctctcactgtgggcttgctcagagccctgctg
gagcagactgggactcaaggacgaccctctggcccagttctaagccaatatgaggacatt
ctatgggacccaggcactccaccccctaccccacctcggggacctatgtcagccctccag
gcatcagaccacccaggcctggaggcatgggcaccatctggacagggcctctgtgtgact
gacacaagctga
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