Phocoena sinus (vaquita): 116742042
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Entry
116742042 CDS
T07759
Symbol
RET
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04010
MAPK signaling pathway
psiu04020
Calcium signaling pathway
psiu04151
PI3K-Akt signaling pathway
psiu05200
Pathways in cancer
psiu05216
Thyroid cancer
psiu05223
Non-small cell lung cancer
psiu05230
Central carbon metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116742042 (RET)
04020 Calcium signaling pathway
116742042 (RET)
04151 PI3K-Akt signaling pathway
116742042 (RET)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116742042 (RET)
05230 Central carbon metabolism in cancer
116742042 (RET)
09162 Cancer: specific types
05216 Thyroid cancer
116742042 (RET)
05223 Non-small cell lung cancer
116742042 (RET)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psiu01001
]
116742042 (RET)
Enzymes [BR:
psiu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116742042 (RET)
Protein kinases [BR:
psiu01001
]
Receptor tyrosine kinases (RTK)
RET family
116742042 (RET)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD1
RET_CLD4
RET_CLD3
Pkinase
Cadherin
RIO1
Pkinase_fungal
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
116742042
NCBI-ProteinID:
XP_032465219
Ensembl:
ENSPSNG00000009662
LinkDB
All DBs
Position
16:11114099..11175472
Genome browser
AA seq
1113 aa
AA seq
DB search
MEKATAGTVGLRLLLLLPLLGEAPLGLYFSRDAYWERLYVDQPAGMPLLYVHALQDVPEE
VPSFRLGQHLYGAYRTRLHENDWVRIQEDTGLLYLNRSLDHSSWEKLSIRNGGFPLLTVY
LQVFLSPTSLREGECQWPGCARVYFSIINASFPACGALKPRDLCFPEMGLSFRIRENRPP
GTFHQFRLLPVQFLCPNVSAAYRLLGGESLPFRCAVDSLEVSTRWALDREKREKYELVAT
CTVRVGAREEEVMVPFPVTVYDEDDSAPSFLGGVDTASAVVEFKRKEGTVVATLRVFDAD
VVPASGELLRRYTSTLLSGDAWALQTFRVEHSPNETLAQANGSFVRATVHDYGLVLNRSL
PISESRAVQLAVLVNDSDFQGPGEGVILLHFNVSVLPVSLRLPSTYSFAASRRARRFAQI
GKVCVENCQEFSGIHVQYRLQLSSANCSALGVVTSAEDTTGTLFVNDTEALQRPECAQLQ
YTVVAVERPTRRQAQAPLLVTLEGTYVAEEPGCPLSCAVSKRRPECEECGGLGSLTGRCE
WRQGDGKGITRNFSTCSPSIKTCPDGHCDAVESRDANICPQDCLRGGSIIGGHEPGERRG
IKAGFGICNCFPEEKKCFCEPEDSQDPLCDELCRTVIAAAVLFSFIVSVLLSTFCIHRYH
KNAHKPPIASAEMTFRRPAQAFPVSYSSSGARRPSLDSVENQVSVDTFKIPEDPKWEFPR
KNLVLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASASELRDLLSEFNLLTQ
VSHPQVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKAGPGYVGSRDSRNSSYLDNP
EERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRRMKISDFGLSRDVYE
EDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF
NLLKTGYRMERPDNCSEEMYSLMLQCWKEEPDKRPVFADISKDLDKMMVKSRDYLDLAAS
TPSDSLLYDDGLSEEEMPLVDCNNAPLPRTLPSTWIENKLYGMSDPNWPEESPVPLTRAD
GTNTGCPRYANDSVYANWMVSPSAAQLMDTFDS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcgacggccggcaccgtggggctgcggttgctgctgctgctgccgctgctc
ggcgaagccccactgggactctacttctcaagggatgcttactgggagaggctgtatgtg
gaccagccggccggcatgcccctgctctacgtccacgccctgcaggacgtccccgaggag
gtgcccagcttccgcctgggccagcacctctacggtgcctaccgcacacggctgcacgag
aacgactgggtccgtatccaggaggacacggggcttctctaccttaaccggagcctggac
cacagctcctgggagaagctcagcatccgcaacggtggcttcccgttgctcaccgtctac
ctccaggtcttcctgtcgcccacgtcccttcgtgagggcgagtgccagtggccgggctgt
gcccgagtgtacttctccatcatcaacgcctccttcccggcttgcggtgccctcaaaccc
cgggacctctgcttccccgagatgggcctgtccttccgcattcgggagaacaggcctccc
ggcaccttccaccaattccgcctgctccctgtgcagttcctctgccccaacgtcagcgcg
gcctacaggcttctaggaggtgagagtctgcccttccgctgcgctgtggacagcctggag
gtgagcacgcgctgggccctggaccgcgagaagcgggagaagtatgagctggtggctacg
tgcacggtgcgcgtcggcgcgcgtgaggaggaggtgatggtgcccttccccgtgaccgtg
tacgacgaagacgactctgcgcccagcttccttgggggcgtcgacaccgccagcgccgtg
gtggagttcaagcggaaggagggcactgttgtggccacactacgtgtcttcgatgcagat
gtggtgccagcatccggggagctcctgagacggtacacaagcacactgctctccggggac
gcctgggccctccagaccttccgagtagagcactcgcccaacgagaccttggcccaggcc
aacggcagctttgtgcgggcaaccgtgcatgactacgggctggttctcaaccggagcctc
cccatctcggagagccgggccgtgcagctggccgtgctggtcaacgactcggacttccag
ggcccgggggagggcgtcatcctcctccacttcaacgtgtctgtgctgcccgtcagcctg
cgcctgcccagcacctactcctttgccgcgagcaggcgggcccgccgcttcgcccagatt
gggaaagtctgtgtggaaaactgccaggagttcagtggcatccacgtgcagtacaggctg
cagctctccagcgccaactgcagcgccctgggggtggtcacctcggccgaggacaccacg
gggaccctgttcgtgaacgacacggaggccctgcagcggcccgagtgtgcccaactccag
tacacggtagtggccgtcgaacggccaacccgccggcaagcccaggccccactgctcgtc
acactggaggggacgtatgtggcagaggagccaggctgccccctgtcctgcgcggtcagc
aagaggcgtcccgagtgtgaggaatgcggcggcctgggctctctgacgggcaggtgcgag
tggagacagggagacggcaaagggatcaccaggaacttctccacctgctcccccagcatc
aagacctgccccgacggccactgtgacgccgtggaaagcagagacgccaacatctgcccc
caggactgcctccggggcggcagcatcattggtgggcacgagcctggggagcgccggggg
attaaagccggcttcggtatctgcaactgcttcccggaggagaagaagtgtttctgtgag
ccggaagacagccaagacccgctgtgtgacgagctttgccgcacagtgatcgcggcagcc
gtgctcttctccttcatcgtgtccgtgctgctgtccaccttctgcatccaccgctaccac
aagaacgcccacaagccacccatcgcctcagctgaaatgaccttccgccggcctgcccag
gcctttccggtcagctactcctcatccggtgcccgccggccctcgctggactccgtagag
aaccaggtctctgtggacaccttcaagatcccggaggatccaaagtgggaattccctcgg
aagaacttggttcttggaaaaactctgggagaaggagaatttggaaaagtggtcaaggca
acggccttccggctgaaaggcaaagcggggtacacgactgtggctgtaaagatgctgaaa
gagaacgcctcggcgagcgagctgcgggacctgctgtcagagttcaacctcctgacgcag
gtcagccacccgcaagtcatcaagctgtacggggcctgcagccaggacgggccgctgctc
ctcattgtggagtatgccaagtacggctccctgcggggcttcctccgagagagccgcaag
gcggggcccggctacgtgggcagcagagacagccgcaactccagctacctggacaacccg
gaggagcgggccctgaccatgggcgacctcatctccttcgcctggcagatctcgcggggg
atgcagtacctggccgagatgaagctcgtccatcgggacttggcagccagaaacgtccta
gtagccgaggggcgcaggatgaagatctcggattttggtctgtcccgagatgtttatgaa
gaggattcctacgtgaagaggagcaagggtcggatcccagtcaagtggatggccattgag
tccctcttcgatcacatctacaccacccagagtgacgtgtggtccttcggtgtcctgctg
tgggagattgtgaccctggggggcaacccctaccctgggattcctccagagcggctcttc
aacctcctgaagacaggctaccggatggagaggccagacaactgcagtgaggagatgtac
agtctgatgctgcagtgctggaaggaggagccagacaagaggccagtgttcgctgacatc
agcaaagacctggataagatgatggttaagagcagagactacttggacctggccgcgtcc
accccatctgattccctgctgtacgacgacggcctgtcggaggaggagatgcccctggtg
gactgtaataacgctcccctccctcgaaccctcccctccacgtggattgaaaacaaactc
tatggcatgtcagacccgaactggcctgaagagagtcctgtaccactcacgagagccgat
ggcaccaacactgggtgtccaagatatgcaaatgatagtgtatatgctaactggatggtt
tcaccctccgcggcacagttaatggacacgtttgatagttaa
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