KEGG   Phocoena sinus (vaquita): 116745065
Entry
116745065         CDS       T07759                                 
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu01524  Platinum drug resistance
psiu03440  Homologous recombination
psiu03460  Fanconi anemia pathway
psiu04120  Ubiquitin mediated proteolysis
psiu04151  PI3K-Akt signaling pathway
psiu05206  MicroRNAs in cancer
psiu05224  Breast cancer
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    116745065 (BRCA1)
  09124 Replication and repair
   03440 Homologous recombination
    116745065 (BRCA1)
   03460 Fanconi anemia pathway
    116745065 (BRCA1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    116745065 (BRCA1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    116745065 (BRCA1)
  09162 Cancer: specific types
   05224 Breast cancer
    116745065 (BRCA1)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    116745065 (BRCA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:psiu01009]
    116745065 (BRCA1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:psiu04121]
    116745065 (BRCA1)
   03036 Chromosome and associated proteins [BR:psiu03036]
    116745065 (BRCA1)
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116745065 (BRCA1)
Enzymes [BR:psiu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     116745065 (BRCA1)
Protein phosphatases and associated proteins [BR:psiu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116745065 (BRCA1)
Ubiquitin system [BR:psiu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116745065 (BRCA1)
  Multi subunit type E3
   BRCC complex
    116745065 (BRCA1)
Chromosome and associated proteins [BR:psiu03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     116745065 (BRCA1)
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     116745065 (BRCA1)
    BRCA1-A complex
     116745065 (BRCA1)
    BRCA1-B complex
     116745065 (BRCA1)
    BRCA1-C complex
     116745065 (BRCA1)
    BRCA complex
     116745065 (BRCA1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     116745065 (BRCA1)
SSDB
Motif
Pfam: BRCT_assoc BRCT zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf-C3HC4_3 RING_XB3-XBAT31 zf-RING_5 BRCT_2 zf-RING_6 zf-ANAPC11 zf-Nse zf-RING_10 zf-rbx1 Prok-RING_4
Other DBs
NCBI-GeneID: 116745065
NCBI-ProteinID: XP_032471301
Ensembl: ENSPSNG00000014034
LinkDB
Position
20:complement(39991414..40053922)
AA seq 1870 aa
MDFSANHVEEVQNVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQ
CPLCKNDITRRSLQESTRFSQLVEELLKIIHAFELDTGLQIANSYNFSKKENNSPEHLKE
EVSIIQSMGYRNRAKRLQQSEPENPTLQGTSLSVQLSNLGIVRSLRTKQQIQPQNKSVYI
ELGSDSSEDAVNKASYFSVEDHELLEITPQGAKAEASLNRAKKAACEFSEKDITKAEHHQ
FSNKDLTTTEKHETEKHPEKYQGIFVSNLHVEPCGTDTHASSLQHENSSLLLTKDRMNVE
KAEFCNKSKQLVLGKSQQSRWAESKDTCNDRQTPSTEKKVVLNADPLYGRKELNKQKPAS
SDSLRDSQEFPWITLNSSIQKVNEWFSRSDEMLTSYDSRDGGFESNTGVARAVEVPKEVD
GYLGSSEKIDLMASDPHGALIRERVHAKPVESNIEDKIFGKTYQRKASLPNLSRIAEDLI
IGASTVEPQITQERPLTKKLQRKRRSTSGLHPEDFIKKVDLAVLPKTPENIIEGTDQTEQ
NGHGMNITSNGHETEMKGGNVQKEKNANRTESLEKESAFRTKAEPISSSISNMELELNIH
SSKAPKNRLRRKSSTRNIHALELVVSRNPSPPNHTELQIESCSSSEEMKKKHSSQMPVRH
GKKLQFMGDKEPTPGAKKSDKPHEQITKRLASDTYPELNLTNIPVFLTHCSSSNKLQEFV
NPSLQREESLGTIQVSNNTKDPKDLTLSGGKGLQIERCVESTSISLVPDTDYGTQDSTSL
LEADTLGKAKTAPNQHVSLCAAIESPKELIPGCSKDIRNDTEDFQDPLGHDVNHIQKASI
EMEESELDTQYLQNMFKVSKRQTFALFSNPENPEKECATVCAHSGSLREQSPRVPLECRQ
KEENQGKSESKVKHVWAINTTVDFPVAGQKDKKPSGHAKCSPERVTRLCQSSQFRGNKTE
LIIANKHGISHNPYLIPSLSPIRSSVKTICKKNLSEEKFEEPVMSPERAMENESIVQSTV
CTVSQINSRESTFKEVSSSSIHEVGSSTNEVGSSINEVGSSGENIQAKLDRNRGPKLSAL
LRLGLMQPEVYKQSLPVSNCQLPEIKRQGENEGTLQAVNEDFSPCLNSDNLEQPMGRSHA
SQVCSETPDELLNDDKIKESSNFAESDIKERSAVFSKGVQKGEFRRSPGPLAHHTPLVQG
HESGAESSEENVSSEDEELPCFQHLFGKVTNTLSPSTRCNAVATEGLSKETEENLISLKN
SLNDCSDHITSAKASQEHHLHEEVRCSDSLFSSRCSVVEDLTANTNTQDPFLMFDPLSKQ
VGHQSENQEVLSDKELVSDDDERETGWEEDNRQEEQSVDSDLGEAASEYENETSLSEDCL
GLSSQSDILTTQQRDTMQDNLLKIQQEMAELEAVLEQHGSQPSHSSPSLIADSCASEDLL
NLEQNTSEKAVLTSEKSSEYPISRNPESLSADKFQVSPDTSTSKNKEPGMERSSPSKLQL
SDNSWYMHSHSRSLQNRNCPPQKELEVVDVEEQQLTESEAQDLMEQSSLPRQDLEGTPYL
ESGISLFSDDPESDPSEDRTPEPAHVCSMPPSASALKLPQFQVVESARSPATSHTTNTAG
YNVREESVSREKPELIPSTQRGNKRISMVASGLTPKEFVLVHKFARKHHITLTNLITEET
THVIMKTDAEFVCERTLKYFLGIAGGRWVVSYFWVTQSIKERKMLDEHDFEVRGDVVNGR
NHQGPKRARESQDRKIFKGLEICCYGPFTNMPTDQLEWMVRLCGASVVKEPSSFTLSQGT
QPIVVVQPDAWTEGGGFHGESCFIGQMCEAPVVTREWVLDSVALYQCQELDTYLIPQVPR
AAADSSLPCI
NT seq 5613 nt   +upstreamnt  +downstreamnt
atggatttttctgcgaatcacgttgaagaagtacaaaatgtccttaatgctatgcagaaa
atcttagagtgtccaatctgtctggagttgatcaaagagcctgtttccacaaagtgtgat
cacatattttgcaaattttgtatgctgaaacttctcaaccagaagaaagggccttcacag
tgtcctttgtgtaagaatgatataaccagaagaagcctacaagaaagtacaagatttagt
cagcttgttgaagagctattgaagatcattcatgcttttgagcttgacacaggattgcag
attgcaaacagttataacttttcaaaaaaggaaaataactctcctgagcatctaaaggag
gaagtttctatcattcaaagtatgggctaccgaaaccgggccaaaagacttcaacagagt
gaacctgaaaatcctaccttgcagggaaccagtcttagtgtccagctctctaaccttgga
attgtgagatctctgaggacaaagcagcagatacaacctcaaaataagtccgtctacatt
gaattgggatctgattcttctgaagatgcagttaataaggccagttatttcagtgtagaa
gaccatgaattgttagaaatcacccctcaaggagccaaggctgaagccagtttgaatcgt
gcaaaaaaggctgcttgtgagttttctgagaaggacataacaaaggctgaacatcatcaa
ttcagtaataaagatttgaccaccactgagaagcatgaaactgagaagcatccagaaaag
tatcagggtatttttgtttcaaacttgcatgtggagccatgtggcacagatactcatgcc
agctcattacagcatgaaaacagcagtttattactcactaaagacagaatgaatgtagaa
aaggctgaattctgtaataaaagcaaacagcttgtcttaggaaagagccaacagagcaga
tgggctgaaagtaaggacacatgtaatgataggcagactcccagtacagagaaaaaggta
gttctgaatgctgatcccctatatgggagaaaagaactgaataagcagaaacctgcatcc
tctgacagtcttagagattcccaagagtttccttggataacactgaatagtagcatacag
aaagttaatgaatggttttccagaagtgatgaaatgttaacttcttacgactcacgtgat
gggggatttgaatcaaacactggagtagctcgtgcagtggaagttccaaaggaagttgat
ggatatttgggttcttcagagaaaatagacttaatggccagtgatcctcatggtgcttta
atacgtgaaagagtccacgccaaaccagtagagagtaatattgaagataaaatatttggg
aaaacctatcagaggaaggcaagcctccctaacttgagccgcatagctgaagatctaatt
ataggagcatctactgtagaacctcagataacacaagagcgccccctcacaaaaaaacta
cagcgtaaaaggagaagtacatcaggccttcatcctgaggattttatcaagaaagtcgat
ttggcagttcttccaaagactccagaaaacataattgagggaactgaccaaacagagcag
aatggtcatgggatgaatattactagtaatggtcatgagactgaaatgaaaggtggtaat
gttcagaaagagaaaaatgctaaccgaacagaatcattggaaaaagaatctgctttcaga
actaaggctgaacctataagcagcagtataagcaatatggaactagaattgaatatccat
agttcaaaagcacctaaaaataggctgaggaggaagtcctctaccaggaacattcatgca
cttgaactagtagtcagtagaaacccaagcccacctaatcatactgaactacaaattgaa
agttgttctagcagtgaagagatgaagaaaaaacattccagccaaatgccagtcaggcac
ggcaaaaagcttcaattcatgggagataaagaacctacacctggagccaagaagagtgac
aagccacacgaacaaataactaagagacttgccagtgacacttacccagaactaaatttg
acaaacatacctgtttttttaactcactgttccagttctaataaacttcaagagtttgtt
aatcctagccttcaaagagaggagagcctaggaacaattcaagtgtcgaataataccaaa
gaccccaaagatctgacattaagtggaggaaaaggtttgcaaattgaaagatgtgtagag
agtaccagtatttccttggtacctgatactgattatggcactcaggatagtacctcatta
ctggaagctgacaccctagggaaggcaaagacagcaccaaaccaacatgtgagtctgtgt
gcagcaattgaaagccccaaggaacttatccctggttgttctaaagatattagaaacgac
acagaggactttcaggatccactgggacatgacgttaaccacattcagaaggcaagcata
gaaatggaagagagtgaacttgatacacagtatttgcagaatatgttcaaggtttcaaag
cgtcagacgtttgctctgttttcaaatccagaaaatccagaaaaggaatgtgcaacagtc
tgtgcccactctgggtccttaagggaacaaagtccaagagtccctcttgaatgcagacaa
aaagaagaaaatcagggaaagagtgaatctaaagtcaagcatgtgtgggcaattaataca
actgtggacttccctgtcgctggtcaaaaagataagaagccgagcggtcatgccaaatgt
agcccagaaagagtaactaggctttgtcagtcatcacagttcagaggcaacaaaactgag
ctcattattgcaaataaacatgggatttcacacaacccatatcttataccatcactttct
cccatcaggtcatctgttaaaactatatgtaagaaaaacctgtcagaggaaaagtttgag
gaacctgtaatgtcacctgaaagagcaatggaaaacgagagcatcgttcaaagtacagtg
tgcacagttagccaaattaacagtcgagaaagcacttttaaagaagtcagctcaagcagt
attcatgaagtaggttccagtactaatgaagtaggctctagtattaatgaagtaggttcc
agtggtgaaaacattcaagcaaaactagatagaaacagaggacctaaattaagtgctttg
ctcagattaggtcttatgcaacccgaagtctataagcaaagtcttcctgtaagtaactgt
caacttcctgaaataaaaaggcaaggagaaaatgaaggcacacttcaggctgttaatgaa
gatttctccccatgtctaaattcagataacctagaacaacctatgggaagaagccatgct
tctcaggtttgttctgagacacctgatgagttgttaaatgatgacaaaataaaggaaagt
agcaactttgctgaaagtgacattaaggaaagatctgctgtttttagcaaaggtgtccaa
aaaggagaattcagaaggagccctggccctttagcccatcatacacctttggttcagggt
cacgaaagtggggctgagtcctcagaagagaatgtgtctagtgaggatgaagagcttccc
tgcttccagcacttatttggtaaagtaaccaatacactgtctccatctaccagatgtaat
gctgttgccacagagggtctatctaaggaaacagaggagaatctaatatcattgaagaat
agtttaaatgactgcagtgaccacataacatcggcaaaggcatcccaggaacatcacctt
cacgaggaagtgagatgttctgatagcttattttcttcacggtgcagtgtagtggaagac
ttgaccgctaatacaaacacccaggatcctttcttgatgtttgatcctctttccaaacaa
gtggggcatcagtctgaaaaccaggaagttctgagtgacaaggaattggtttcagatgat
gatgaaagggaaactggctgggaagaggataatcgccaagaagagcagagtgtggattca
gacttaggtgaagcagcatccgagtatgagaatgaaacaagcctctctgaagactgtttg
gggctgtcctctcagagcgatatcttaaccactcagcagagggataccatgcaagataac
ctgctaaagatccagcaggaaatggccgaactggaagctgtgttagagcagcacgggagc
cagccttctcacagctccccttccctcatagccgattcttgtgcctctgaggacctgcta
aatctggagcaaaacacatcagaaaaagcagtattaacttcagagaaaagtagtgaatat
cctataagccggaatccagaaagcctttctgctgacaagtttcaagtatctccagatact
tccaccagtaaaaataaagaaccaggaatggaaaggtcttccccttctaaattgcagttg
tcagataatagttggtatatgcacagccactcaaggagtcttcagaacagaaactgccca
cctcaaaaggagcttgaggttgttgatgtggaggagcaacagctgacggagtctgaggcc
caggatttaatggagcagtcttctttgccaagacaagatctagagggaaccccttaccta
gaatctggaatcagcctcttctctgatgaccctgagtctgatccctctgaagacagaacc
ccagagccagctcatgtctgcagcatgccaccctcagcctctgcactgaaattaccccaa
tttcaagtagtagaatctgccaggagtccggctacatctcatactactaatactgcaggg
tataatgtgagggaagaaagtgtgagcagggagaagccagagttgataccttcaacacaa
agaggcaacaaaagaatttctatggtggcatcaggcttgaccccaaaagaatttgtgctt
gtgcacaagtttgccagaaaacatcacatcactttaactaatctaattactgaagagact
actcatgtcattatgaaaacagatgctgagtttgtgtgtgaacggacactgaaatatttt
ctgggaattgcaggaggaagatgggtagttagctatttctgggtgacccagtctattaaa
gaaagaaagatgctggatgagcatgattttgaagtcagaggcgatgttgtcaatggaaga
aaccatcaaggcccaaagcgagcaagagaatcccaggacaggaagatcttcaagggctta
gaaatctgttgctatggaccatttaccaatatgcccacagatcaactagagtggatggta
cgtctgtgtggggcttctgtggtgaaggagccctcgtcattcaccctcagccagggtact
caaccaattgtggtcgtgcagccggatgcctggacagagggcggtggcttccatggtgag
tcttgcttcatcgggcagatgtgtgaagcacctgtggtgacccgagagtgggtattggac
agcgtagccctctaccagtgccaggagctggacacctacctgataccccaggtccccaga
gctgctgctgattccagcctgccatgtatatag

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