KEGG   Phocoena sinus (vaquita): 116745209
Entry
116745209         CDS       T07759                                 
Symbol
TRAF4
Name
(RefSeq) TNF receptor-associated factor 4
  KO
K09848  TNF receptor-associated factor 4
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04657  IL-17 signaling pathway
psiu05200  Pathways in cancer
psiu05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09150 Organismal Systems
  09151 Immune system
   04657 IL-17 signaling pathway
    116745209 (TRAF4)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    116745209 (TRAF4)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    116745209 (TRAF4)
SSDB
Motif
Pfam: zf-TRAF TRAF-mep_MATH zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-TRAF_2 zf-Nse zf-RING_5 zf-RING_2 zf-RING_6 TRAF3_RING zf-C3HC4_4 Sina_ZnF zf-rbx1 MATH
Other DBs
NCBI-GeneID: 116745209
NCBI-ProteinID: XP_032471641
Ensembl: ENSPSNG00000016406
LinkDB
Position
20:complement(15747521..15753608)
AA seq 470 aa
MPGFDYKFLEKPKRRLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLP
LDYAKIYPDPELEVQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPAK
LSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAFESHEGVCPQESVYCENKCGARMMRRLL
AQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTMAREDLPGHLK
DSCSTALVLCPFKDSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELE
ELSVGSDGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEG
THLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKP
GTWRGSLDESSLGFGYPKFISHQDIRKRNYVRDDAVFIRASVELPRKILS
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgcccggctttgactacaagttcttggagaagcccaagcggcggctgctgtgcccgctg
tgcgggaagcccatgcgcgagcccgtgcaggtttctacctgcggccaccgcttctgcgac
acctgcctgcaggagttcctcagtgaaggagtcttcaagtgccctgaggatcaacttcct
ctggactatgccaagatctacccagacccagagctggaggtacaggtactgggcctgcct
atccgctgcatccacagtgaggagggctgccgctggagtgggccacttcgccacctacag
ggccacctgaatacctgcagcttcaacgtagtcccctgccccaaccgctgccccgccaag
ctgagccgccgggatctgcccgcgcacctgcagcacgactgccccaagaggcgactcaag
tgcgagttctgtggctgtgacttcagcggggaggcctttgagagccacgaaggtgtgtgc
ccacaagagagtgtgtactgtgagaacaaatgcggggcccgcatgatgcggcggctcctg
gcccagcatgccacctctgagtgccccaagcgcacccagccttgcacttactgcaccaag
gagtttgtctttgacaccatccagagccaccagtaccagtgcccgaggctgcctgtgccg
tgccccaaccagtgtggcgtgggcaccatggctcgggaggatctgccgggccacctcaag
gacagctgtagcactgccctggtgctgtgcccattcaaagactccggctgcaagcacagg
tgccctaagctggcaatggcacggcacgtggaggagagcgtgaagccacatctggccatg
atgtgtgccctggtgagccggcaacggcaagagctgcaggagctgcgaagagagctggag
gagctctccgtgggcagtgatggcgtgctcatctggaagatcggcagttacgggcgaagg
ctgcaggaggccaaagccaagcccaacctcgagtgcttcagccccgccttctacacgcat
aagtatggctacaagctgcaggtgtctgcattcctcaatggcaatggcagtggtgagggt
acacatctctcgctctacattcgcgtgctgccaggtgcctttgacaatctccttgagtgg
ccctttgcccgccgcgtcaccttctccctgctggatcagagcgaccctgggctggctaag
ccacagcatgtcactgagacctttcaccctgacccaaactggaagaatttccaaaaacca
ggcacttggcggggctccctggatgagagttctctgggctttggttaccccaagttcatc
tcccaccaggatatccgcaagcgaaactatgtgcgggatgatgcagtcttcatccgtgcc
tctgttgaattgccccgaaagatcctcagctga

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