Phocoena sinus (vaquita): 116745482
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Entry
116745482 CDS
T07759
Symbol
TRIM37
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37 isoform X1
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116745482 (TRIM37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116745482 (TRIM37)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116745482 (TRIM37)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116745482 (TRIM37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
zf-C3HC4_2
HlyD_2
MRFAP1
LAMB1
PIN_8
BORCS6
Motif
Other DBs
NCBI-GeneID:
116745482
NCBI-ProteinID:
XP_032472123
Ensembl:
ENSPSNG00000019523
LinkDB
All DBs
Position
20:complement(29016898..29165392)
Genome browser
AA seq
968 aa
AA seq
DB search
MDEQSVESIADVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRSAKDERVR
EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSNLFNFRYEYRVEMVHQSCNDP
TKNIIREFASDFEVGECWGYNRFFRLDLLANEGYLNRQNDTVILRFQVRSPTFFQKCRDQ
HWYITQLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDTPETRAKKS
GSCADMLLQDGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVGEDEVSHLDGS
SSSASSTATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPSGSNHGYMGAS
SRMSRRAHLSSAATSSLLDIDPLILIHLLDLKDRSSMENLWGLQPRPPASLLQPTASCSR
KDKDQRKQQAMWRVPSDLKMLKRLKTQIAEVRCMKTDVKNTLPEIKSSNAASGDMPASLL
SVDQAALAACGTENSSRLQDLGMELLARSSVASCYIRNSTNKKSNSPKPPRSSIAGSLSL
RRAVDSGENSHSKGDCQTLSEGSPGSSQSGSRHSSPRALTHGSIGDVLPKSEDRQCQALD
SDAVVVAVFSGLPTIEKRRKMVTLGTSVKGGRLEGMQMTDLENNSETGELQPILPEGASV
APEEGMSSDSDIECDAEDEEQEERASLGRFSDSFMARLPDEDTHSSFPDGEQIGPEDLSF
NTDESSGR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacagagcgtggagagcattgctgatgttttccgatgtttcatttgtatggag
aaattgcgggatgcacgcctgtgtcctcattgctccaagctttgttgtttcagctgtatc
aggcgctggctgacagagcagagagctcaatgtcctcattgccgggctccactccagcta
cgagaactagtcaactgtcgttgggcagaagaagtaacacagcagcttgatactcttcaa
ctctgcagtctcaccaaacatgaagaaaatgaaaaggacaaatgtgaaaatcaccatgaa
aaacttagtgtattttgctggacttgtaagaagtgtatctgccatcagtgtgcactttgg
ggaggaatgcatggtggacatacctttaaacctttggcggaaatttatgagcagcatgtt
actaaagtgaatgaagaggtagccaaacttcgtcggcgtctcatggaactgatcagctta
gttcaagaagtggaaagaaatgtcgaagctgtaagaagtgcaaaagatgagcgtgttcgg
gaaattagaaatgcggtggagatgatgattgcacggttagacacacagctgaagaataag
cttataacactgatgggtcagaagacatctctgacacaagaaacagaacttttggaatcc
ttacttcaggaagtagagcaccagttgcgatcttgtagtaagagtgagttgatatctaag
agctcagagatcctcatgatgtttcagcaagttcatcgaaagcccatggcgtcctttgtt
accactccagttccaccagactttaccagtgaattggtaccatcttatgattcagctact
tttgttctagagaatttcagtactttgcgtcagagagcagatcctgtttacagtccacct
cttcaagtttcaggactttgttggaggttaaaagtttacccagatggaaatggagttgtt
cgtggttactacttatctgtgtttctggaactctcagctggcttgccagaaacttccaat
cttttcaattttagatacgaataccgtgtagagatggttcatcagtcctgcaatgatcct
accaaaaatatcattcgagaatttgcatctgactttgaagttggagaatgttggggttat
aatcgatttttccgtttggacttacttgcaaatgaaggatacttgaatcgacaaaatgat
acagtgattttaaggtttcaggttcgttcaccaactttctttcaaaaatgccgggaccag
cattggtatattactcaattggaagctgcacagactagctatatccaacaaataaataac
cttaaagagagacttactattgagttgtctcgaactcagaaatcaagagatttgtcacca
ccagataatcatcttagcccccaaaatgatgacactcctgagacacgagctaagaagtct
ggatcatgtgctgacatgcttctccaagatggtcctactacagcttctgtaagagaggcc
aaggaggatgaagaagatgaggagaagattcagaatgaagattatcatcatgagctttca
gatggagatctggatctggatcttgttggtgaagatgaagtaagtcatctcgatggcagc
agttcttctgccagttccacagcaacaagtaacacggaagaaaatgacattgatgaagaa
accatgtctggagaaaatgatgtggaatacaacaacatggaattggaagagggagaactc
atggaagatgcagctgcagcaggaccttcaggtagtaaccatggctatatgggtgccagt
agcagaatgtcaagaagagcacatttatcctctgctgctaccagtagtttattagacatt
gatcctttaatattaatacatttgttggaccttaaggaccggagcagtatggaaaatctg
tggggcttacagcctcgcccgcctgcttcacttttgcagcccacagcatcgtgttctcga
aaagataaagaccaaaggaagcagcaggcaatgtggcgagttccctctgatttaaagatg
ctaaaaagactcaaaactcaaatagctgaagttcgatgtatgaaaactgatgtaaagaat
acacttccagaaataaaaagcagcaacgccgcttctggagacatgccggcaagccttctt
tctgttgaccaggcagctctggctgcatgtggaaccgaaaactccagcagattacaggat
ttgggaatggagctcttggcaaggtcatcagttgccagttgttacatacgaaactccaca
aataagaagagtaattcacccaagccacctcggtccagtatagcaggtagtctgtcactt
cgaagagcagtagactctggggaaaatagccattcaaagggagactgtcaaactctgtct
gagggctccccaggaagctctcagtctgggagcaggcacagttctccccgagccttgaca
catggcagtatcggtgacgtcctgcccaaatctgaagaccggcagtgtcaagctttggat
tcagatgctgttgtggttgcagttttcagtggcttacctactattgaaaaaaggagaaaa
atggtcaccttggggactagtgttaaaggaggtcgtctggaaggaatgcaaatgactgat
ttggaaaataattctgaaactggggaattacaacctatactacctgaaggagcttcagtt
gccccagaggaaggaatgagtagcgacagtgatattgaatgtgacgctgaggacgaggag
caggaggagcgcgccagcctgggcagatttagcgactccttcatggcacggctgccggat
gaagatacacattccagttttcctgatggtgaacaaataggccctgaagatctcagcttc
aatactgatgaaagcagtggaaggtaa
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integrated database retrieval system
