Phocoena sinus (vaquita): 116746380
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Entry
116746380 CDS
T07759
Symbol
PLEKHM1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04140
Autophagy - animal
psiu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116746380 (PLEKHM1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116746380 (PLEKHM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116746380 (PLEKHM1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116746380 (PLEKHM1)
Membrane trafficking [BR:
psiu04131
]
SNARE
SNARE associated proteins
Others
116746380 (PLEKHM1)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
116746380 (PLEKHM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
OapC
Motif
Other DBs
NCBI-GeneID:
116746380
NCBI-ProteinID:
XP_032473741
Ensembl:
ENSPSNG00000020792
UniProt:
A0A8C9CWL4
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All DBs
Position
20:complement(41712293..41763232)
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AA seq
1062 aa
AA seq
DB search
MLSAVENGLDPRAAIPVIKKKLVGSVKALQKQYVSLDTAVTSEDGDANSMCSALEAVFIH
GLHTKHIRAEAGGKRKKSAHQKPLPQPVFWPLLKAVTHKHIISELEHLIFVSTDVGRCRA
WLRLALNDGLMECYLKLLLQEQARLCEYYQPTALLRDAEEGEFLLSFLQGLTSLSFELSY
KSAILNEWTLTPLALSGLCPLSELDPLTTSGAELQRKESLDSISHSSGSEDIEVQHSGHK
IRRNRGLTASSLSLDTASSSQLSCSLNSDSCLLQENGSKSPDRSEEPMSCDSDLGMANAD
DSDPSLQEVLSEFSKAQVNSVPTNRLSHEAEVPTLQALLALRGLDTSTPLRLEVPAEPHP
AQASPGTRDGDRKQEPLSQAPGALGWPQPGSAQAVPLGSTSGQQPPSPVREATRAVGQGS
GQWKPPKEDGPRLSLVVPLPTSPKSTSWISEDDFYRPPREQPAESPSHDSVAFPRGTPEP
RPGLLTQGPRRSCSMEALDKACVPSLGSRRSKAAPTPEHKNFRVVHRRQMGLSNPFRGLL
KLGTVERRGAMGIWKELFCELSPLELRLYLSGEERTCVENCSLLRCESVGPAHSDGRFEL
VFSGKKLTLRSSCRDEAEDWLDRVREALQKCRRPQQEEEWVTIQYPDQPEDPPEAPQGGC
PSHSDLLSEPETPQGPQLDWSSSQVPEPDAIKESLLYLYTDRTWMPCIFSLSLESLKCFR
VRNNEKMLSDSHGVETIRDILPDTSLGGPSFFKIITAKAVLKLQAGNAEEAALWRDLVRK
VLASYLETAEEAVTLGGSLDENCQEVLKFATRENGFLLQYLVAIPTEKGLDSQGCFCAGC
SRQIGFSFVRPKLCAFSGLYYCDICHQDDASVIPARIIHNWDLTKRPVCRQALKFLTRIR
AQPLINLQLVNASLYEHVERMHLIGRSREQLKLLGDYLGLCRSGALKELSKRLSHRNYLL
ETPHKYSVADLQQIADGVYEGFLKSLIEFASQHVYHCDLCTQRGFICQICHHHDIIFPFE
FDTTVRCGECKTVFHQSCQAVMKKGCPRCARRLKYQQQSTLA
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgctctcagcggtggagaatggactggacccccgggctgccatcccggtcatcaagaag
aagctagtgggctccgtgaaggcactgcagaagcagtacgtgtccttggacacagcagtc
acaagtgaagacggagatgccaacagcatgtgcagcgccctggaagccgtcttcatccac
ggcctgcacaccaagcacatccgagccgaggccggagggaaaaggaagaaaagtgcccac
cagaagcctctgcctcagcctgtcttctggcccctcctgaaagctgtcacccacaaacac
atcatctcggaattggagcacctgatcttcgtgagcacggacgtgggccgctgccgggcc
tggctgcggctggccctcaatgacggcctgatggagtgctacctgaagctgctgctgcag
gagcaggcccgcctgtgcgagtactaccagcccacggccctgctccgtgacgccgaggag
ggcgagttcctcctgagcttcctgcagggcctgacgtccctgtccttcgagctctcctac
aagtctgccatcctaaacgagtggacgctcaccccgctggccctctccgggctctgccca
ctctcggagctcgaccccctcactacctctggagcggaactacagcggaaggagtctctg
gattccatctcccattcctcaggctcggaggacatcgaggtccagcactcgggccataag
atccgacggaacagggggctcacggcctcctccctcagtctggacacggccagttcgtcc
cagctctcttgcagcctcaactctgacagctgcctgctccaagagaatggctccaagagt
ccagaccgttccgaggagcccatgtcctgcgactcagacctggggatggcaaatgctgat
gattcggacccgtctctgcaagaggtgttgtcggaattcagcaaagcccaggtgaactct
gtgccaaccaacagactgagccacgaagcggaggttcccacgctgcaggccttgctcgcc
ctccgcggcctggacaccagcacacccctgcgccttgaggtacctgcagagccccacccc
gcccaagcatcccctgggactcgagatggggaccgcaagcaggagccgctttcccaggca
cctggcgccctgggctggccacagccgggcagtgcccaagctgtccctttggggagcact
tcaggccagcagcctcctagtcctgtgagggaggcgaccagagcagtcggccaaggaagt
ggccagtggaagcctccgaaggaggacggacctcggctgagccttgtggttcccttgccc
accagtccgaaaagcacgagctggatctcagaagatgacttctaccggcctccccgggaa
cagcccgcagagagtccttcccatgattccgtggcttttcccagagggactccagagccg
aggcctggtctcctcacgcaaggaccaagaagaagctgttccatggaggccttagacaaa
gcttgtgtgccttccctaggaagcaggagaagcaaggccgccccgacgccggagcataag
aacttcagggtggttcatcgcaggcagatggggctgtctaacccattccgggggcttctg
aagctgggcacggtggagcggcggggggccatgggcatctggaaggaactcttctgcgag
ctctccccgctggagttgcgcctctacctgagcggcgaggagcgcacctgcgtggagaac
tgctctctgctgcgctgtgagtccgtgggcccggcccacagcgatggccgcttcgagctg
gtcttctcgggcaagaagctgaccctgcgctcctcgtgccgcgatgaagctgaggactgg
ctggaccgtgtgcgcgaggcgctgcagaagtgccggcggccccagcaggaggaggagtgg
gtgaccatccagtacccagaccagcccgaggaccctccggaggccccccagggtggctgc
ccctcccactcggacctgctctcggagcctgaaaccccccagggcccgcagcttgactgg
tcttcttcccaggttcccgagcctgacgctattaaggaatcccttctgtacctgtacaca
gaccggacctggatgccctgtatcttctccctgtccttggagtctctgaagtgcttccgc
gtgagaaacaatgagaagatgttaagtgacagccatggagtcgagaccatccgagatatc
ctgccggacacgagccttgggggcccatccttcttcaaaatcatcacggccaaggccgtc
ctgaagctgcaggccgggaacgctgaggaggccgccctgtggagggacctggtgcgcaag
gtcctggcgtcctacctggagacagctgaggaggcagtgacactcggtgggagtctggat
gaaaactgtcaggaggtgctgaagttcgccacgcgggagaatggcttcctgctgcagtac
ctggtggccatccccacggagaaaggcctcgactcccagggctgcttctgtgcaggctgc
tcccggcagatcggcttctcgtttgtacggcccaagctctgtgccttctctggcctctat
tactgtgacatctgccatcaagacgatgcctcagtgatcccggccaggatcatccacaac
tgggacctcaccaagcgcccggtctgcaggcaggccctgaagttcctgacgcggatccgg
gcccagcccctcatcaacctgcagctggtgaacgcgtctctgtacgagcacgtggagcgg
atgcacctcatcggtaggagccgggagcagctgaagctcctgggggattacctgggcctg
tgccgaagcggagccctgaaggagctgagcaagagactcagccacaggaattatctcttg
gagactcctcacaagtacagtgtcgcggacctccagcagatcgcagacggggtgtatgaa
ggattcctcaagtccctgatcgagtttgcctcccagcacgtctaccactgcgacctatgc
acccagcgtggcttcatctgccaaatctgccaccaccatgacatcatcttcccctttgag
tttgacaccacagtcaggtgtggcgaatgcaagaccgtcttccaccagagctgtcaggcc
gtgatgaagaagggctgcccccgctgtgcccgccggctcaagtaccagcaacagagcact
ctcgcctaa
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