Phocoena sinus (vaquita): 116747542
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Entry
116747542 CDS
T07759
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04360
Axon guidance
psiu04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
116747542 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
116747542 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psiu01009
]
116747542 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116747542 (TRPC5)
Protein phosphatases and associated proteins [BR:
psiu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116747542 (TRPC5)
Ion channels [BR:
psiu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116747542 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
116747542
NCBI-ProteinID:
XP_032475765
Ensembl:
ENSPSNG00000021455
UniProt:
A0A8C9EBV4
LinkDB
All DBs
Position
X:complement(95373281..95516427)
Genome browser
AA seq
974 aa
AA seq
DB search
MAQLYYKRVNYSPYRDRIPLQIVRAETELSAEEKAFLSAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKMENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIIRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPQRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHQRRSFSTSSTELSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKACHGPPLIRTMPRVGGGQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGHMSEPSSEPMYTISDGVVQPHYMWQDIKYSQMEKGKAESCSQSEI
NLSEVELGEARGAAQSSECPLACSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgtactacaaaagggtcaactactcaccctacagagaccgaatccccctg
caaatcgtgagggctgagacggagctctctgcagaggagaaggccttcctcagtgccgtg
gagaagggggactacgccactgtgaagcaggccctccaggaggccgagatctactacaat
gtcaacatcaactgcatggacccactgggccggagcgccctgctcattgccattgagaat
gagaacctggagatcatggagctactgctgaaccacagcgtgtacgtcggtgacgcattg
ctctacgccatccgcaaggaagtggtgggcgctgtggagcttctgctcagctacaggcgg
cccagtggagagaagcaggtccccactctgatgatggacacccagttctctgagttcaca
ccggacattactcccattatgcttgctgcccacaccaacaactacgaaatcatcaaattg
ctcgtccaaaaacgggtcactatcccccggccccaccagatccgctgcaactgtgtggag
tgtgtgtccagttcagaggtagacagcctgcgccactcccgctcccggttgaacatctat
aaagcgctggcaagcccctcacttatcgccttatcaagcgaggaccccatcctaactgcc
ttccgcctgggctgggagctcaaggagctcagcaagatggagaacgagttcaaggctgag
tatgaggagctctcccagcagtgcaagctctttgccaaagacctgctggaccaggctcgg
agctcccgggaactggagatcatcctcaaccatcgagatgaccacagtgaagagcttgac
cctcaaaagtaccatgacctagccaagctgaaggtggccatcaaataccatcagaaagag
tttgtggcccagcccaactgccaacagttgcttgccactctgtggtacgatggcttccct
ggatggcggcggaaacactgggtagtcaagcttctgacgtgcatgaccattgggttcctg
tttcccatgctgtctattgcttatctgatctcacccaggagtaaccttgggctgttcatc
aagaaaccctttatcaagtttatctgccacacggcctcctatctgaccttcctcttcatg
cttctcctggcttctcagcacatcatcaggacggacctccatgtgcaggggcctcccccg
actgtagtggaatggatgatattgccttgggttctcggtttcatttggggggagattaag
gaaatgtgggatggtggatttactgaatacatccatgattggtggaacctgatggatttt
gcaatgaactcactctacctggcaactatttccttgaagatcgtggcctatgtcaagtat
aatggttctcgtccaagggaagaatgggaaatgtggcacccaactctgattgcagaagct
ctctttgcgatatccaacattttaagttcgttgcgtctcatatccctcttcacagccaac
tcccacttagggcctctgcagatctctttggggcgcatgttgcttgatatcctcaaattc
ctctttatctactgcctggtactgctggcttttgccaatggattgaaccagctttacttt
tattatgagaccagagcaatcgatgagcccaacaactgcaaggggatccgatgcgagaaa
cagaacaatgccttctccacgctctttgaaacccttcagtcactcttctggtctgtattc
ggccttttgaatctctatgttaccaatgtaaaagccagacacgagttcacagagtttgtg
ggagcgaccatgtttgggacgtacaacgtcatctccctggtagtgctgctgaacatgctg
atcgccatgatgaacaactcctaccagcttattgccgatcatgccgacattgagtggaag
tttgcaaggacgaagctctggatgagttacttcgatgaaggcggcaccttgccacctcct
ttcaacatcatccccagccccaagtcatttctataccttggtaactggttcaacaacacc
ttctgcccccaaagagaccctgatggtagacggagaaggcacaacttgagaagcttcaca
gaacgccatgctgacagcctgatacagaatcaacattaccaggaagttatcaggaattta
gtcaaaagatatgtggcagctatgataagaaattccaaaacaaatgagggactaacagaa
gaaaattttaaggaattaaagcaggacatttccagctttcgatatgaagtgcttgacctc
ttaggaaataggaagcaccaaaggagaagtttttccactagcagcactgaactctctcag
agagatgataccaacgatggcagtggcggggctcgggccaaatccaagagtgtctctttc
aatttaggctgcaagaaaaaagcctgccatgggccacctctcatcaggaccatgccaaga
gttggtggtggccaagggaagtcaaaagctgagtcatcaagcaaacgctccttcatgggt
ccctctctcaagaaactgggtctcctattctccaagtttaatggtcatatgtctgaaccc
agttcagagccgatgtacacaatttctgatggagtcgttcagccgcactatatgtggcag
gacatcaaatattctcagatggagaaagggaaagcagagtcctgttctcaaagtgaaatt
aacctcagtgaggtagaattaggtgaagcccggggcgctgctcagagcagtgaatgccct
ctagcctgttccagctctcttcactgcgcatccagcatctgctcctcaaattctaaactt
ttagactcctcagaggatgtatttgaaacttggggagaggcttgtgacctgctcatgcac
aaatggggtgatggacaggaagaacaagttacaactcggctctaa
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