Phocoena sinus (vaquita): 116748433
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Entry
116748433 CDS
T07759
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04064
NF-kappa B signaling pathway
psiu04620
Toll-like receptor signaling pathway
psiu04621
NOD-like receptor signaling pathway
psiu04622
RIG-I-like receptor signaling pathway
psiu04657
IL-17 signaling pathway
psiu04668
TNF signaling pathway
psiu04936
Alcoholic liver disease
psiu05160
Hepatitis C
psiu05161
Hepatitis B
psiu05162
Measles
psiu05164
Influenza A
psiu05165
Human papillomavirus infection
psiu05167
Kaposi sarcoma-associated herpesvirus infection
psiu05168
Herpes simplex virus 1 infection
psiu05169
Epstein-Barr virus infection
psiu05171
Coronavirus disease - COVID-19
psiu05200
Pathways in cancer
psiu05203
Viral carcinogenesis
psiu05222
Small cell lung cancer
psiu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
116748433 (TRAF3)
04668 TNF signaling pathway
116748433 (TRAF3)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116748433 (TRAF3)
04621 NOD-like receptor signaling pathway
116748433 (TRAF3)
04622 RIG-I-like receptor signaling pathway
116748433 (TRAF3)
04657 IL-17 signaling pathway
116748433 (TRAF3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116748433 (TRAF3)
05203 Viral carcinogenesis
116748433 (TRAF3)
09162 Cancer: specific types
05222 Small cell lung cancer
116748433 (TRAF3)
09172 Infectious disease: viral
05161 Hepatitis B
116748433 (TRAF3)
05160 Hepatitis C
116748433 (TRAF3)
05171 Coronavirus disease - COVID-19
116748433 (TRAF3)
05164 Influenza A
116748433 (TRAF3)
05162 Measles
116748433 (TRAF3)
05168 Herpes simplex virus 1 infection
116748433 (TRAF3)
05167 Kaposi sarcoma-associated herpesvirus infection
116748433 (TRAF3)
05169 Epstein-Barr virus infection
116748433 (TRAF3)
05165 Human papillomavirus infection
116748433 (TRAF3)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
116748433 (TRAF3)
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
116748433 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
zf-C3HC4
MPS2
zf-C3HC4_2
Spc29
ATG16
zf-RING_4
Cast
zf-RING_5
KxDL
ADIP
GAS
Tropomyosin
DUF3450
DUF1664
SPATA24
LMBR1
FliJ
THOC7
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
116748433
NCBI-ProteinID:
XP_032477248
Ensembl:
ENSPSNG00000011207
LinkDB
All DBs
Position
2:175843165..175964783
Genome browser
AA seq
572 aa
AA seq
DB search
MTHRMEPSKKLDAAGTLPANPPLKLHPDRGAGPAVLVPEQGGYKERFVKAVEDKYKCEKC
RLVLCNPKQTECGHRFCETCMGALLSSSSPKCTACREGISKDKVFKDNCCKREILALQIY
CRNEGRGCVEQLALGHLLVHLKNDCQFEELLCVRADCKEKVLRKDLRDHVDKACKYREAT
CGHCRSQVPMITLQKHEDTECPCVVVSCPHKCSVQTLLRSELSAHLSECVNAPSTCSFKR
YGCVFQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQIC
SFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQSWEEAGSMKSSVES
LQSRVTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNG
VLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFV
IMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPV
FVAQTVLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgacacacaggatggagccgagtaaaaagctggacgcagccggcaccctgccagccaac
cccccactgaagctgcaccccgaccgcggcgccgggcctgccgtcctggtccccgagcag
gggggctacaaggagcgcttcgtgaaggccgtggaggacaagtacaagtgtgagaagtgc
cgcctggtgctctgcaaccccaagcagaccgagtgcggacatcgcttctgcgagacctgc
atgggcgccctgctcagctcctccagcccgaaatgcactgcgtgtcgagaaggcatcagc
aaagacaaggtgtttaaggataattgctgcaagagagagattctggcccttcagatatac
tgtaggaacgaaggcagaggctgtgtagagcagttagcactggggcacctgctggtgcat
ttgaagaatgattgccagtttgaggaacttttgtgtgtccgtgccgactgcaaagagaag
gtgctgaggaaggacctacgtgaccacgtggacaaggcctgtaaataccgtgaggccacg
tgcggccactgcagaagccaggtcccgatgataacgctgcagaaacacgaagacaccgag
tgtccctgcgtggtggtgtcctgccctcataagtgcagtgtccagacccttctgaggagc
gagttgagtgcacacttgtcagagtgtgtcaatgcccccagcacctgtagttttaagcgc
tatggctgcgtttttcaggggacaaaccagcagattaaggcccacgaggccagctccgcg
gtgcagcatgtcaacttactcaaagaatggagcaactctctagagaaaaaggtttccttg
ctgcagaatgaaagcgtagaaaaaaacaagagcatacagagtttgcacaaccagatatgc
agctttgaaattgaaattgagagacaaaaggaaatgcttcgaaataatgaatccaaaata
cttcatttacagcgagtaatagacagccaagcggagaaactgaaggagctcgacaaggag
atccgccccttccggcagagctgggaggaggcaggcagcatgaagagcagcgtggagtcg
ctccagagccgggtgaccgagctggagagtgtggacaagagtgcagggcaggcggctcgg
aacacaggcctgctggagtcccagctgagccggcacgaccagatgctgagtgtccacgac
atccgcctggccgacatggacctgcggttccaggtcctggagacggccagctacaacggt
gtgctgatctggaagatccgggattacaagcggcggaagcaggaggccgtcatggggaag
accctgtccctctacagccagcctttctacaccggctatttcggctacaagatgtgcgcc
agggtctacctgaacggggacggcatgggcaaggggacgcacctgtcgctgttcttcgtc
atcatgcgtggagagtacgacgccctccttccctggccgttcaagcagaaggtgacactc
atgctgatggaccaggggtcctcccggcgacacctgggggacgctttcaagccggacccc
aacagcagcagcttcaagaagcccaccggcgagatgaacatcgcttccggctgcccagtc
ttcgtggcgcagactgtgctggaaaacgggacgtacattaaagatgataccatttttatc
aaagtcatagtggatacttcggacctgccagacccctga
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