Phocoena sinus (vaquita): 116748544
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Entry
116748544 CDS
T07759
Symbol
AGBL1
Name
(RefSeq) LOW QUALITY PROTEIN: cytosolic carboxypeptidase 4
KO
K23436
cytosolic carboxypeptidase protein 4 [EC:
3.4.17.24
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116748544 (AGBL1)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.24 tubulin-glutamate carboxypeptidase
116748544 (AGBL1)
Peptidases and inhibitors [BR:
psiu01002
]
Metallo peptidases
Family M14: carboxypeptidase A family
116748544 (AGBL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pepdidase_M14_N
CTNNBL
Ig_CFAP65
Motif
Other DBs
NCBI-GeneID:
116748544
NCBI-ProteinID:
XP_032477577
LinkDB
All DBs
Position
2:complement(40805545..41477125)
Genome browser
AA seq
1533 aa
AA seq
DB search
LQSSSDRESTLTILQVLGDLLSVGTDRRICYVISKGGSEALLQTLVDTARTAFPDYDILL
PLFRLLAKVGLRDKKFGQKALEFEALDVTLILARKNLSHSQNLLHCLWALRVFAFSVTTG
AMLGINGAMELLLKVITPYTQKRTRVIRAATEVLAALLKSKSNSRRAVNRGYVAILLRLH
QDWHSHDTTNSYVLIRRALLLCLRHIANLRSGREAFRAAQGMEILFSTAQNCLDDKSLEP
VISLVLQILRQCYPKSPLPLVTASSAYSFPVPGSTASEPPHVLTEEDFEDDGEEEEDKDS
DSEDVKKEDDDLETDVNKLSSKPGLDRPEEELMQYEAMCLELSCSFEELESKPGDGLNFD
KTQYASHHHILTAASPKGLCLNKDQISSGQEREVPVQTSLLSRVKMGRSNIHLTSKKGPG
MNPYRNAQSNGLGIGSSGSEISDIQESFKEDAWDIDVISCPRISASFSSSTRPRETAELI
DKLLQTHPTHIAFHDPYLYMAKARRTRSVSDFTMTAFPDFWGHCPPPSAQSMLERKCGVQ
RIKIFEDVRRLIQPSDIINKVVFSLDEPWPLQDTTSDCLRFFSKFESGNLRKAIQVRELE
YDLLINADVNSTQHQQWFYFKVSGMREAVPYRFNIINCEKANSQFNYGMQPTLYSVKEAL
LGRPAWVRTGYEICYYKNHYRQSAAITGAESGKCYYTLTFAVTFPHAEDVCYLAYHYPYT
YTALMTHLDVLEKSVNPKQVYFRQEVLCQTLGGNSCPLVTITAMPESNSAGHLEQLRQRP
YQVITARVHPGESNASWVMKGTLEFLVSSDPVARLLRENFIFKIIPMLNPDGVINGNHRC
SLRGGDLNRQWLSPSAHLQPTIYHAKGLLHYLGSIGRRPMVFCDFHGHSQKRNVFLYGCS
IKETLWQAESAVGTSNLLEDVSYRTLPKILDKLAPAFTLSSCSFLVEKSRASTARVVVWR
EMGVSRSYTMESSYCGCNQGPYQCAXRLLSESKGDRRHALFNXQGLQFGTSELEEMGSMF
CLGLLILELKSVSCSHQLLTCAAALLNAEESSLDHHLQRYHGAEGSCGVSNSSNSGSSSS
NSSSSSNTGVSNSSNSGSSSSNSSSSSNTGVSNSSNSTSSSSNSSSSSNTGVSNSSNSGS
SSSNSSSSSNTGVSNSSNSGSSSSNSSSSSNTGVSNSSNSGSSSSNSSSSSNTGVSNSSN
STSSSSNSSSSSNTGVSNSSSSNSSSSSNTGVSNSSNSTSSSSVSNSSNSGSSSSNSSSS
SNTGVSNSSNSGSSSSNSSSSSNTGVSNSSNSNSSSSSNTGVSNSSNCTSSSSNSSSSSN
TGVSNSSNSGSSSSNSSSSSNTGVSNSSNSTSSSSNSSSSSNTGVSNSSNSRSSSSNSSS
SNNTGVSNSSNSGSSSSNSSSSSNTGVSNSSNSGSSSSFNRFIIPPSFGVLTVMLRKLIE
LALPQGSPKELNEKTNNNQKIVCNWLEEDMAQGHLTGSFGGAGNLTVDEGPTAAHNVEKF
SSLQQEAAKGKGDGSTQLGQEAPAKDSVRIGDP
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
ttgcagagctcctctgacagggagtccaccctgaccatcctccaggtcctcggagatctg
ctttccgttggcacagaccggaggatttgctacgtgatcagcaagggtggtagcgaagcc
cttctgcagaccctggtggacacagccaggacggcttttccagactatgatatcctcttg
cccctcttccggctgctggccaaagttggcctacgagataaaaagtttggacagaaggca
ctggaatttgaagcacttgatgtgacattgattctggcgaggaaaaacctgtctcacagc
cagaacctcctccactgtctctgggctctgcgtgtctttgcctttagtgtcaccactgga
gccatgctgggaattaatggagcgatggaactgcttctcaaggtcatcaccccttatacc
cagaagcgcacccgagtaatcagggcagccactgaagttctggcagcattgctgaaatcc
aagtctaacagccgcagggcagtgaacagaggctatgtcgccatcttgctccggctgcat
caggactggcacagccatgacacgaccaattcctatgtgctgatccgcagggcgcttctg
ctttgcctcaggcatattgccaacctccggtctggcagggaggccttccgggcagctcag
ggcatggagatccttttcagcaccgcacagaactgcctggatgacaaaagtctggagcct
gtcatctcccttgtgcttcagatcctgaggcaatgctaccctaagagtccacttcccttg
gtcacagccagcagtgcttattccttcccagtgcctgggagcaccgcctctgaacctcca
catgttctaactgaagaagattttgaagatgatggcgaggaagaagaggacaaagactca
gattctgaagatgtgaaaaaggaagatgatgacttggaaacagatgtgaacaagctgagc
tccaaacctggtcttgatcgacctgaagaggaactgatgcaatatgaggcgatgtgtctt
gagctctcctgcagttttgaggaactggagtccaaacctggagatggtttgaactttgac
aagactcagtatgccagtcaccaccacattctgactgctgcctccccaaaagggctttgc
ttgaataaggaccaaatctcctcgggacaagaaagagaagtccctgtccagacctccctt
ctgagcagagtgaagatggggaggtccaacatacatctaacctccaaaaaaggacctgga
atgaacccataccgaaatgcacaatccaatggtcttgggataggttcttccggaagtgaa
atctcagacattcaggagtccttcaaagaggatgcttgggacatagatgtgatttcctgc
ccaaggataagtgcctccttttccagttccactagacctagagaaactgctgaattaata
gataagctcctgcagacacatccgacgcatattgccttccatgacccctatctttatatg
gccaaagctagaagaaccagatctgtgtctgacttcacaatgacggcatttcctgatttc
tgggggcattgtccacctccctctgcccagtccatgttggaacgtaaatgtggagtccaa
aggatcaaaatatttgaggatgtccggaggctcatccagccaagcgatattataaataaa
gttgtcttcagtctagatgagccttggcctttgcaagataccacttctgactgcttacgg
ttcttctccaagtttgagtctggaaatcttcgcaaagccatccaagtgcgtgagttggag
tacgacttactgatcaatgctgatgtgaatagcacacagcaccagcagtggttctacttc
aaggtgagcggtatgagggaggcggtcccttatcgcttcaacattatcaactgtgagaag
gccaacagccagttcaattacgggatgcagccaactctgtattctgtgaaggaggctctt
cttggcagacctgcctgggtacggacaggctatgaaatctgttattacaaaaatcattat
cgccagagcgcagccatcacaggggcagagtctgggaagtgctattacaccctcaccttt
gccgtcaccttcccgcatgccgaggatgtctgctacctggcctaccactatccctacacc
tacaccgccctcatgactcaccttgacgttctggaaaaaagcgtgaaccccaagcaggtc
tacttccgtcaggaggttctctgccagacgctaggagggaattcatgtccattggtgacc
atcactgccatgcccgagtctaacagcgctggccacctggagcagctccggcagcgccca
taccaggtgattactgctcgagttcacccgggagagagcaatgccagctgggtgatgaag
gggaccttagagttcctggtcagcagtgaccctgtggctaggctcttgagggaaaacttc
attttcaagatcatccccatgctcaacccagatggtgtcatcaatggcaaccacagatgc
tcactgagaggaggggatttgaacagacagtggctctctcccagtgcccatctgcagccc
acaatttaccacgccaaagggctcctgcactacctgggcagcatcggccggcgtcccatg
gtcttctgtgatttccatggtcactcccaaaagaggaatgtgttcctttacggttgtagc
atcaaagagactttgtggcaggcagagtctgctgtgggcacatccaatctcttggaagat
gtcagctacaggactcttcccaaaatccttgataaactagcgccagcattcaccttaagc
agctgcagcttcctcgtggagaaatcccgagcctccacagcacgcgtagtggtgtggaga
gagatgggggtgtccagaagctacaccatggagagcagctactgtggctgcaaccagggc
ccctatcagtgtgcataacgacttctgtcagagtcaaaaggagacagaaggcatgctttg
tttaactgacagggtctacagtttggtaccagtgaactggaggagatgggatctatgttc
tgcttgggcctcctcatcttggaactcaaatctgtaagctgcagccatcagctgctgacc
tgtgcagcagctctactgaatgctgaggagtcatctctggaccaccacctccagcggtat
catggtgctgagggcagttgtggtgttagtaacagcagcaacagcggaagcagcagcagt
aacagtagtagcagtagtaatacaggtgttagtaatagcagcaacagcggaagcagcagc
agtaacagtagtagcagtagtaatacaggtgttagtaatagcagcaacagcacgagcagc
agcagtaacagtagtagcagtagtaatacaggtgttagtaacagcagcaacagcggaagc
agcagcagtaatagtagtagcagtagtaatacaggtgttagtaacagcagcaacagcgga
agcagcagcagtaacagtagtagcagtagtaatacaggtgttagtaacagcagcaacagc
ggaagcagcagcagtaacagtagtagcagtagtaatacaggtgttagtaacagcagcaac
agcacgagcagcagcagtaatagtagtagcagtagtaatacaggtgttagtaacagcagc
agcagtaatagtagtagcagtagtaatacaggtgttagtaatagcagcaacagcacgagc
agcagcagtgttagtaacagcagcaacagcggaagcagcagcagtaatagtagtagcagt
agtaatacaggtgttagtaacagcagcaacagcggaagcagcagcagtaacagtagtagc
agtagtaatacaggtgttagtaacagcagcaacagtaatagtagtagcagtagtaataca
ggtgttagtaatagcagcaactgcacgagcagcagcagtaatagtagtagcagtagtaat
acaggtgttagtaacagcagcaacagcggaagcagcagcagtaatagtagtagcagtagt
aatacaggtgttagtaacagcagcaacagcacgagcagcagcagtaatagtagtagcagt
agtaatacaggtgttagtaacagcagcaacagcagaagcagcagcagtaatagtagtagc
agtaataatacaggtgttagtaacagcagcaacagcggaagcagcagcagtaatagtagt
agcagtagtaatacaggtgttagtaacagcagcaacagcggaagcagcagcagttttaat
aggttcattattccacctagttttggggtcctgacagttatgctgcggaaactcattgaa
ttggctttacctcaaggcagtcccaaggaactaaatgagaagacaaacaataatcagaag
attgtttgtaactggctggaagaagacatggcacagggacatctcacagggtcctttgga
ggagcaggcaatctaactgttgatgaagggcccacagcagctcataatgtagagaaattt
tcctctctgcagcaggaagctgccaaggggaagggtgatggcagtacccagttggggcag
gaggcccccgccaaggattctgtccgcattggggacccctga
DBGET
integrated database retrieval system
