Phocoena sinus (vaquita): 116750832 Help Entry 116750832         CDS       T07759                                  Symbol SQSTM1 Name (RefSeq) sequestosome-1 isoform X1   KO K14381   sequestosome 1 Organism psiu  Phocoena sinus (vaquita) Pathway psiu04137   Mitophagy - animal psiu04140   Autophagy - animal psiu04217   Necroptosis psiu04218   Cellular senescence psiu04380   Osteoclast differentiation psiu05014   Amyotrophic lateral sclerosis psiu05022   Pathways of neurodegeneration - multiple diseases psiu05418   Fluid shear stress and atherosclerosis Brite KEGG Orthology (KO) [BR:psiu00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     116750832 (SQSTM1)    04137 Mitophagy - animal     116750832 (SQSTM1)   09143 Cell growth and death    04217 Necroptosis     116750832 (SQSTM1)    04218 Cellular senescence     116750832 (SQSTM1)  09150 Organismal Systems   09158 Development and regeneration    04380 Osteoclast differentiation     116750832 (SQSTM1)  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     116750832 (SQSTM1)    05022 Pathways of neurodegeneration - multiple diseases     116750832 (SQSTM1)   09166 Cardiovascular disease    05418 Fluid shear stress and atherosclerosis     116750832 (SQSTM1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:psiu04131]     116750832 (SQSTM1)    03029 Mitochondrial biogenesis [BR:psiu03029]     116750832 (SQSTM1)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:psiu04147]     116750832 (SQSTM1) Membrane trafficking [BR:psiu04131]  Autophagy   Mitophagy    Cargo receptors     116750832 (SQSTM1)   Pexophagy     116750832 (SQSTM1)   Aggrephagy     116750832 (SQSTM1)   Xenophagy     116750832 (SQSTM1)   Other autophagy associated proteins    Midbophagy     116750832 (SQSTM1) Mitochondrial biogenesis [BR:psiu03029]  Mitochondrial quality control factors   Mitophagy factors    Parkin-dependent mechanism factors     116750832 (SQSTM1) Exosome [BR:psiu04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    116750832 (SQSTM1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UBA_5 PB1 ZZ Motif Other DBs NCBI-GeneID:  116750832 NCBI-ProteinID:  XP_032481985 Ensembl:  ENSPSNG00000009189 LinkDB All DBs Position 3:17533695..17546101 Genome browser AA seq 440 aa AA seqDB search MASLTVKAYLLGKEDAAREIRRFSFCFSPEPEAEAESTAGPRPCERLLSRVAALFPVLRP GGFQAHYRDEDGDLVAFSSDEELKMAMSYVKDDIFRIYIKEKKECRRDHRPPCAQEVPRN MVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGMHREHSKLAFPSPFGRPSEGFS HSRWLRKLKHGHFGWPGWEMGPPGNWSPRPPRAGDAHPGPAAESASGPSEDPSVNFLKNV GESVAAALSPLGIEVDIDVEHGGKRSRLTPTFPGSSTPEEKCSSQTSSCCSNPSKPDGDV EGMAQSLVEQVNKIALESGGQPEEQMESDNCSGGDDDWTHLSSKEVDPSTGELQSLQMPE SEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTK DYDIGAALDTIQYSKHPPPL NT seq 1323 nt NT seq  +upstreamnt  +downstreamnt atggcgtcgctcaccgtgaaggcctaccttctgggcaaggaggacgcagcccgcgagatc cgccgcttcagcttctgttttagcccggagcctgaagcggaagctgagtccacagctggc ccgcggccctgcgagcggctgctgagccgggtggccgccctgttccccgtactacggccc ggcggcttccaggctcactaccgcgatgaggacggggacttggttgccttttccagtgac gaggaactgaagatggcaatgtcatatgtgaaggatgacatcttccgtatttacattaaa gagaagaaggagtgccggcgggaccaccgacccccgtgtgctcaggaggtgccccgaaac atggtgcaccccaacgttatctgtgatggttgcaacgggccagtggtggggacccgctac aagtgcagcgtctgtcctgactacgacctatgctctgtctgcgaggggaagggcatgcac agggagcacagcaagcttgccttccccagccccttcgggcgcccttctgagggcttctct cacagccgctggctgcggaagctgaaacacgggcactttgggtggcctggctgggagatg ggcccaccggggaactggagcccacgtcctcctcgagcgggggatgcccaccctggcccc gctgcagaatcagcttctggtccatcggaggatcccagtgtgaatttcctcaagaatgta ggggagagtgtggcagctgccctcagccctctgggcattgaagtcgatattgacgtggaa catggaggaaagagaagccgcctgacacccaccttcccaggcagctccaccccagaggag aagtgtagctctcagacaagcagctgctgttccaaccccagcaagccagacggggacgtg gagggcatggcacagtctctggtggagcaagtgaacaagatcgccctggagtcagggggt cagcctgaggaacagatggagtctgataactgttcaggaggagatgatgactggactcat ttgtcttcaaaagaggtggacccatctacaggtgaactccagtctttacagatgcctgaa tctgaagggccaagctctctggacccttcccaggaaggacccacagggctgaaggaagct gcattgtacccacatttgccaccagaagctgacccccggctgattgagtccctctcccag atgctatccatggggttctctgatgaaggcggctggctcaccaggctcctacagaccaag gattatgacatcggggctgccctagacaccatccagtattcaaaacacccaccaccgttg tga

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