Phocoena sinus (vaquita): 116751293
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Entry
116751293 CDS
T07759
Symbol
HMMR
Name
(RefSeq) hyaluronan mediated motility receptor isoform X1
KO
K06267
hyaluronan-mediated motility receptor
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116751293 (HMMR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
psiu04090
]
116751293 (HMMR)
00536 Glycosaminoglycan binding proteins [BR:
psiu00536
]
116751293 (HMMR)
CD molecules [BR:
psiu04090
]
Proteins
116751293 (HMMR)
Glycosaminoglycan binding proteins [BR:
psiu00536
]
Hyaluronan
Cell surface receptors
116751293 (HMMR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMMR_N
HMMR_C
Rab11-FIP3
Motif
Other DBs
NCBI-GeneID:
116751293
NCBI-ProteinID:
XP_032482894
Ensembl:
ENSPSNG00000010894
LinkDB
All DBs
Position
3:complement(33076891..33106893)
Genome browser
AA seq
715 aa
AA seq
DB search
MSFSKAPLKRFNDPSGCAPSPGAYDVKTSEVLKGPVSFRKSQRFKNQKAESQQNLNVDKD
TTLPASARKVKTSGLKKESQKNEKDLKMLEKEIRVLVQERGAQDKRIQDLEAELEKMEAK
LNAAVREKTSLSASNASLEKQLIELTRTNELLKSKFSDDSNQKNLRILSLELMKLRNKRE
IKMRSMMAKQEGMEVKLQVTQKNLEESQEKIAQLEGKIISIEKEKIDEKSETEKLLEYIE
EISCASDQVEKYKLDIAQLEENLKEKNHEVLSLKQSLEENVAILSKQVEDMNAKCQLLEK
EKEDLINRDREQDENLNSEIRNLKERSVLEQQEHEELQQKVLQIDSLLQQEKELSSSLQQ
KLCSFQEEMVKERNLFEGELKQALDELDKLQQKEEQVESLVKQLEEESESRGEELKLIEE
RLKGKEAELEKSNAAHAQATLLLQERYNSTVQSLRDVTTQFESYKASAASEIEDLKVENM
SLHEKVAKAEKSAEDVQHEILATENANQEYARMLLDLQTKSALKEAEVKEITVSFLKKIT
DLQNQLKQQGEDFKKQLEKGEARKAGKEKSTAELTEEMNKWRLLYEELYNKTKPFQLQLD
AFEAEKQALLNEHGAAQEQLNKLRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKL
RAQLAKRKQHETKLQEELNKVLGIKHFDPSKSFLHESKENFVLKTPLKEGNTNCS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttctaaggcgcccctgaaacgattcaatgacccttctggatgtgcaccatct
ccaggtgcttatgatgttaaaacttcagaagtattaaaaggaccagtatcctttcggaag
tcacaaaggtttaaaaatcaaaaagcagaatctcaacaaaatcttaatgttgacaaagat
actaccttgcctgcttcagcaagaaaagtgaagacttcgggattaaagaaagaatctcaa
aagaatgaaaaagatttgaagatgttggaaaaagagattcgtgttcttgtgcaggaacgt
ggtgctcaagacaagcggatccaggatctggaagctgagttggagaagatggaagcaaag
ctaaatgctgccgtcagggaaaaaacatctctctctgcaagtaatgcttcactggaaaaa
cagcttattgaattaaccaggactaatgagctactaaaatctaagttttctgatgatagt
aaccagaagaatttgagaattctaagccttgagttgatgaaacttagaaacaaaagagaa
ataaagatgaggagcatgatggctaaacaagaaggcatggaggtgaagctgcaggttacc
cagaagaatctcgaagagtctcaggagaaaatagcacaacttgaggggaagattatttca
atagagaaagaaaagattgatgaaaaatctgaaacagaaaaacttttagaatacatcgaa
gaaataagttgtgcatcagatcaagtggaaaaatacaagctagatattgcccagttagaa
gaaaatctgaaagagaagaatcatgaagttttaagccttaagcagtctctggaggaaaat
gttgctatattgtctaaacaagtagaagacatgaatgctaaatgccagctgcttgaaaaa
gaaaaagaagacctcatcaatagggacagagaacaggatgaaaatctaaactctgagata
cgaaacttaaaagagaggtctgttcttgaacaacaagaacatgaagagctacaacaaaaa
gtattgcaaattgattcacttctgcaacaagagaaggaattatcttctagtcttcaacag
aagctatgttcttttcaagaggaaatggttaaagagaggaatctctttgagggagaatta
aagcaagcactggatgagctagataaattacagcaaaaggaggaacaagttgaaagcctg
gtcaagcaattggaagaagaatcagaatctagaggtgaagaactaaaactcatagaagaa
agactgaaagggaaagaagctgaactggagaaaagtaacgcagctcatgctcaggccaca
ctgcttttgcaggaaaggtataacagtacagtgcagagcctgagagatgttaccactcaa
tttgaaagctataaagcatcagccgcaagtgagatagaagatcttaaggtggagaacatg
tcacttcacgaaaaagtggccaaggctgagaaaagtgcagaggatgttcagcatgagata
ttggcaactgagaatgcaaatcaagaatatgcaaggatgcttctagatctgcagaccaaa
tcagcacttaaagaagcagaagttaaagaaatcacagtttcttttcttaaaaaaataact
gatttgcagaaccaactcaagcaacaaggcgaagactttaagaaacaactggaaaaggga
gaagcaagaaaagctggaaaagaaaaatcaacggcagaattaactgaggaaatgaataag
tggcgtctcctctatgaagaattatataataaaacaaaaccatttcagctacaactggat
gcatttgaagcagagaaacaggcgttgttgaatgaacatggtgcagctcaggagcagctg
aataaactaagagattcgtatgctaaattattgggtcatcagaatctaaagcaaaaaatc
aagcatgttgtgaaattgaaagatgaaaatagccaactcaaatcggaggtgtcaaaactc
cgcgctcaacttgctaaaagaaaacaacatgaaacaaaacttcaggaggaattgaataaa
gttctgggtatcaaacactttgatccttcaaagtcttttcttcatgaaagtaaagaaaat
tttgttctcaaaaccccgctaaaagaaggcaatacaaactgctcctga
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