Phocoena sinus (vaquita): 116751332
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Entry
116751332 CDS
T07759
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu01521
EGFR tyrosine kinase inhibitor resistance
psiu04010
MAPK signaling pathway
psiu04014
Ras signaling pathway
psiu04015
Rap1 signaling pathway
psiu04020
Calcium signaling pathway
psiu04072
Phospholipase D signaling pathway
psiu04151
PI3K-Akt signaling pathway
psiu04510
Focal adhesion
psiu04540
Gap junction
psiu04630
JAK-STAT signaling pathway
psiu04810
Regulation of actin cytoskeleton
psiu05165
Human papillomavirus infection
psiu05200
Pathways in cancer
psiu05206
MicroRNAs in cancer
psiu05214
Glioma
psiu05215
Prostate cancer
psiu05218
Melanoma
psiu05230
Central carbon metabolism in cancer
psiu05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116751332 (PDGFRB)
04014 Ras signaling pathway
116751332 (PDGFRB)
04015 Rap1 signaling pathway
116751332 (PDGFRB)
04630 JAK-STAT signaling pathway
116751332 (PDGFRB)
04020 Calcium signaling pathway
116751332 (PDGFRB)
04072 Phospholipase D signaling pathway
116751332 (PDGFRB)
04151 PI3K-Akt signaling pathway
116751332 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116751332 (PDGFRB)
04540 Gap junction
116751332 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116751332 (PDGFRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116751332 (PDGFRB)
05206 MicroRNAs in cancer
116751332 (PDGFRB)
05230 Central carbon metabolism in cancer
116751332 (PDGFRB)
05231 Choline metabolism in cancer
116751332 (PDGFRB)
09162 Cancer: specific types
05214 Glioma
116751332 (PDGFRB)
05218 Melanoma
116751332 (PDGFRB)
05215 Prostate cancer
116751332 (PDGFRB)
09172 Infectious disease: viral
05165 Human papillomavirus infection
116751332 (PDGFRB)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
116751332 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psiu01001
]
116751332 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
psiu04090
]
116751332 (PDGFRB)
Enzymes [BR:
psiu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116751332 (PDGFRB)
Protein kinases [BR:
psiu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
116751332 (PDGFRB)
CD molecules [BR:
psiu04090
]
Proteins
116751332 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
ig
I-set
Ig_2
V-set
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
116751332
NCBI-ProteinID:
XP_032482995
Ensembl:
ENSPSNG00000018303
UniProt:
A0A8C9CRT2
LinkDB
All DBs
Position
3:45668743..45707417
Genome browser
AA seq
1103 aa
AA seq
DB search
MRPPSAMRAPVLEGQVLLLPLLLLLGPPASWGLVITPPGPELVLNLSSTFVLTCSGPAPV
VWERMSQKPPQEMTTSQDGTFSSVLTLTNVTGLDTGEYFCTYKGSHGLEASERKRLYIFV
PDPTVGFLPVDPEELFIFLTEITETTIPCRVTDPRLVVTLHEKKVDVPLPIAYDHQRGFS
GTFEDKTYVCKTTIGDREVDSDAYYVYSLQVSSINVSVNAVQTVVRQGENITIMCIVTGN
EVVNFEWTYPRMESGRLVEPVTDFLFEMPHIRSILHIPSAELGDSGTYICNVSESVSDHR
DEKAINVTVVESGYVRLLGELDPVQFAELHRSRTLQVVFEAYPPPTVMWFKDNRTLGDSG
AGEVALSTRNVSETRYVSELTLVRVKVAEAGRYTMRAFHEDAEAQLSFQLQVNVPVRVLE
LSESHPASGEQTVRCRGRGMPQPHLSWSTCSDLKRCPLELPPTPLGNSSEEESLLETNVT
YWAEEQEFEVVSTLRLRRVDQPLSVRCTLHNLLGQDVQEVTVVPHSLPFKVVVISAILAL
VVLTIISLVILIMLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRDQLV
LGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPH
LNVVNLLGACTKGGPIFIITEYCRYGDLVDYLHRNKHTFLLRCSNKRRPPSAELYSNALP
VGLPLPSHVSLPGESDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVPS
APERTCRVTLINESPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVK
ICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGG
TPYPELPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLERL
LGEGYKKKYQQVDEEFLRSDHPAVLRSQARLPGFNGLRSPLDTSSVLYTAVQPNEGDNDY
IIPLPDPKPEVADEGPLEGSPSLASSALNEVNTSSTISCDSPLEPQEEPEPEPQPESQVE
PEPKRPPDSSCPGPRAEAEDSFL
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctccgagtgccatgcgagctcctgtcctcgaaggccaggtgctgttgctgccc
ttgctgttgttgctgggaccaccggcctcgtggggcctggtcatcacacccccggggcca
gagcttgtcctcaatctctccagcacctttgttctgacctgctcgggtccagctccagtg
gtgtgggaacggatgtcccagaagcccccacaggaaatgaccacgagccaggacggcacc
ttctccagtgtgctgacactgaccaatgtcactgggctagacacaggagagtacttttgt
acctacaaaggctcccatgggctggaggccagcgagcgaaaacgactctacatctttgtg
ccagatcccactgtgggcttcctccctgttgaccccgaggaactattcatctttctcacg
gaaataactgagaccacaattccatgccgagtgacggatccaagactggtggtgacgttg
catgagaagaaggtggatgtcccgctgcccatcgcctatgaccaccaacgtggcttctct
ggtacctttgaggacaagacctacgtctgcaaaaccaccatcggggacagggaggtggat
tcggatgcctactatgtctacagcctccaggtgtcatccatcaacgtctcagtgaatgcg
gtgcagactgtggtccgccaaggggagaacatcaccatcatgtgcattgtgactgggaac
gaggtggtcaactttgagtggacatacccacgcatggagagtgggcggctggtggagcca
gtgaccgacttcctctttgaaatgccccacatacgttctatcctgcacatccccagtgcc
gagctgggagactcagggacctacatctgcaatgtatcagaaagtgtgagcgaccatcga
gatgaaaaggccatcaatgtcaccgtggtcgagagcggttacgtgcggctgctgggagag
ctggaccctgtacaattcgcggagcttcaccgcagccggacactgcaggtggtgttcgag
gcctacccgccgcccactgtcatgtggttcaaggacaaccggaccctgggtgactccggc
gccggcgaggttgcgctgtccacgcgcaatgtgtctgagacccggtacgtgtcagaactg
acactggtgcgggtgaaggtggctgaagctggccgctacaccatgcgggccttccatgag
gatgctgaagcccagctctccttccagctgcaggtcaacgtgcctgtccgtgtgctggag
ctgagcgagagccaccctgccagcggggagcagacagtccgctgtcgtggccggggcatg
ccccagccacacctcagctggtctacctgcagcgacctcaaaaggtgtccgctggagctg
cctcccacgccactggggaacagttccgaggaggagagcctgctggagacgaacgtgaca
tactgggcagaggagcaggagttcgaggtggtgagcacactgcgcctgcgccgtgtggat
cagccgctgtccgtgcgctgcacgctgcacaacctcctgggccaagacgttcaggaggtc
accgtggtgccacattccttacccttcaaggtggtggtgatctcggcaatcctggccttg
gtggtgctcacgatcatctccctcgtcatcctcatcatgctctggcagaagaagccacgc
tatgagatccgatggaaagtgattgaatctgtgagctctgatggccatgaatacatctac
gtggaccctatgcagctgccttacgactccacctgggagctgccgcgggaccagcttgtg
cttggacgcaccctgggctccggggcctttgggcaggtggtggaggccacggctcatggc
ctgagccattcgcaggctaccatgaaagtggccgtcaagatgctgaaatccacagcccgc
agcagcgagaagcaagccctcatgtcggagctgaagatcatgagtcacctcgggccccac
ctgaacgtggtcaacctgctgggggcctgcactaaaggagggcccatcttcatcatcacc
gagtactgccgctacggcgacctggtggactacctgcaccgcaacaagcacacctttctg
ctgcgctgctccaacaagcgccgcccgcccagcgctgagctctacagcaacgccctgccc
gttgggctcccgctgcccagccatgtgtccctgcctggggagagtgatggtggctacatg
gacatgagcaaagatgagtcagtggactacgtgcccatgctggacatgaaaggggacgtc
aaatacgcagacatcgagtcctccaactacatggctccttatgataactacgtcccctcc
gctcctgagaggacctgccgggtgactttaatcaacgagtccccagtacttagctacacg
gatcttgtgggcttcagctaccaggtggccaatggcatggagttcctggcctccaagaat
tgcgtccaccgagatctggcagccaggaatgtgctcatctgtgagggcaaactggtcaag
atctgcgactttggcctggcccgtgacatcatgcgggattcgaactacatctccaaaggc
agtaccttcctgcctctgaagtggatggcccccgagagcatcttcaacagcctctacacc
accctgagcgacgtgtggtccttcgggatcctgctctgggagatcttcaccctgggtggc
accccgtacccagagctgcccatgaacgagcagttctacaatgccatcaagcggggctac
cgcatggctcagcctgcccatgcctctgacgagatctatgagatcatgcagaagtgctgg
gaagagaagtttgagattcggccccccttctcccagctggtgctgcttctcgagagactg
ctgggcgagggttacaaaaagaagtaccagcaggtggatgaggagtttctgaggagcgac
cacccagccgtccttcggtcccaagcccgcttgcccggcttcaatggcctccgatccccc
ctggacaccagctccgtcctctacactgctgtgcagcccaacgagggtgacaacgactat
atcatccccctgcctgaccccaaacccgaggttgctgatgagggaccactggagggttcc
cccagccttgccagctccgccctgaatgaagtcaacacctcctctaccatctcctgtgac
agccccctggaaccccaagaggaaccagagccagagccccagcctgagtcccaggtggag
ccagagcccaagcggccgccggattccagctgccctgggcctcgggccgaggcggaggac
agcttcctgtag
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