Phocoena sinus (vaquita): 116751578
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Entry
116751578 CDS
T07759
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00310
Lysine degradation
psiu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116751578 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116751578 (PRDM6)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116751578 (PRDM6)
Enzymes [BR:
psiu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
116751578 (PRDM6)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116751578 (PRDM6)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116751578 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
116751578
NCBI-ProteinID:
XP_032483570
Ensembl:
ENSPSNG00000003380
UniProt:
A0A8C9B3T4
LinkDB
All DBs
Position
3:complement(70744829..70844535)
Genome browser
AA seq
594 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPHSGGGPLKGGGAAGPLGAPQPLQPPPPPERTE
PQPDSLRPRPASLSSASSTPASSSTSASSASSCAAAAAAAAAAALAGLSALPVAQLPVFA
PLAAAAVAAEPLPSKDLCLGTVSGPGPSKCGGGGGVGDVRGAPRFRCSAEELDYYLYGQQ
RMEIIPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPELPEWL
RDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAGAVRNTQHLWEI
YDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELL
VWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDPLQPFNKSSKLSPAAQQRSVVF
PQTPCGRNFSLLDKSGPMESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQCFKT
FTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGA
TTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggagaccccggcggctcggcattcctcaaagtggacccagcttatctg
cagcactggcagcaactcttcccgcacagcggcggcggcccgctcaagggcggcggtgcc
gcgggtcccctgggcgcaccgcagcctctccagccgccgccccccccggagcgcactgag
ccccagccggacagcctgcgcccgcggcccgcctcgctctcctccgcctcctccactccg
gcttcctcctccacctcggcctcctctgcctcctcctgcgccgcggcggccgccgccgcc
gccgccgccgcgctggccggtctctcggccctgcccgtggcgcagctgccagtgttcgcg
cctctggccgccgccgccgtcgccgcggagccgctgccctccaaggacctgtgcctcggc
accgtctcgggcccggggccctccaagtgcggaggcggaggcggcgtcggggatgtccgg
ggcgccccgcgcttccgctgcagcgcagaggagctggactattacctgtacggccagcag
cgcatggagatcatcccgctcaaccagcacaccagcgaccccaacaaccgttgcgacatg
tgcgcagacaaccgcaacggcgagtgccccatgcacgggccgctgcactcgctgcgccgg
ctcgtgggtaccagcagcgccgcggccgccgcgccccctccggagctgcccgagtggctt
cgggacttgccacgggaggtgtgtctgtgcaccagcaccgtgcccggcctggcctacggc
atctgcgcggcgcagaggatccagcagggcacctggattgggcccttccagggcgtgctc
ctgccgccggagaaggtgcaggccggcgccgtgaggaacacgcagcatctctgggagata
tatgaccaagatgggacactacagcactttattgatggtggggaacctagtaagtcgagc
tggatgaggtatatccgatgtgcaaggcactgcggagaacagaatctaacagtagttcag
tacaggtcgaatatattctaccgagcctgtatagatattcccaggggtaccgagcttctg
gtgtggtacaatgacagctatacgtctttctttgggatccctttacaatgcattgcccag
gatgaaaacttaaatgtcccctcgacggtcatggaagccatgtgcagacaggaccccctg
cagcccttcaacaagagcagcaaactctcccccgccgcccagcagcgctccgtcgtcttc
ccgcagactccgtgcggcaggaacttctccctcctggataagtctgggcccatggaatca
ggatttaatcaaatcaacgtgaaaaaccagcgagtccttgcaagcccgacctccaccagc
cagctccactcggagttcagtgactggcatctttggaagtgcgggcagtgctttaagact
ttcacacagaggatcctgttacagatgcacgtgtgcacgcagaaccccgacagaccatac
cagtgcggccactgctcccagtccttttcccagccttcagaactgaggaaccacgtggtc
actcactccagtgaccggcctttcaaatgtggctactgtggtcgtgcctttgctggggcc
accacgctcaacaaccacatccgaacccacactggagaaaagcccttcaagtgcgagagg
tgtgagaggagcttcacgcaggccacccagctgagccgacaccagcggatgcccaatgag
tgcaagccaataaccgagagcccagaatcaatcgaagtggattaa
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integrated database retrieval system
