Phocoena sinus (vaquita): 116753063
Help
Entry
116753063 CDS
T07759
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04514
Cell adhesion molecules
psiu04520
Adherens junction
psiu04910
Insulin signaling pathway
psiu04931
Insulin resistance
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116753063 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116753063 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
116753063 (PTPRF)
09160 Human Diseases
09167 Endocrine and metabolic disease
04931 Insulin resistance
116753063 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psiu01009
]
116753063 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116753063 (PTPRF)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
116753063 (PTPRF)
Protein phosphatases and associated proteins [BR:
psiu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
116753063 (PTPRF)
Cell adhesion molecules [BR:
psiu04515
]
Immunoglobulin superfamily
Type II RPTP family
116753063 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
PTP-SAK
Tc-R-P
Interfer-bind
DSPc
C2-set_2
V-set
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
Motif
Other DBs
NCBI-GeneID:
116753063
NCBI-ProteinID:
XP_032486412
Ensembl:
ENSPSNG00000002986
UniProt:
A0A8C9DY58
LinkDB
All DBs
Position
1:35859971..35946043
Genome browser
AA seq
1910 aa
AA seq
DB search
MAPEPASGRTMVPLVPALVMLGLVAGAHGDSKPVFIKVPEDQTGLSGGVASFVCQATGEP
KPRITWMKKGKKVSSQRFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSA
KLSVLEEEQLPPGFPSIDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPAAS
NGRIKQLRSGALQIESSEESDQGKYECVATNSAGTRYSAPANLYVRDQREVRRVAPRFSI
PPSSQEVMPGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELSNVVRSANY
TCVAISSLGMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNSEPVSYYGIQYRP
AGAEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSP
PRRVQARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRRPLSAWHKHNTDAGLLTTVG
SLLPGITYSLRVLAFTTVGDGPPSPTIQVKTQQGVPAQPADFQADADSDTRIQLSWLLPP
QERIIKYELVYWAAEDAGQQHKLTFDPTSSYTVEDLKPDTLYRFQLAARSEMGVGVFTPT
VEARTAQSTPSAPPQKVTCVSVGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRER
HVVGGIGREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVE
VEPLNSTAVRVSWKLPVPSKQHGQIRGYQVTYVRLENGEPRGPPIIQDVMLAEAQWRPEE
SEDYETTISGLTPETTYSITVAAYTTKGDGARSKPKIVTTTGAVPGRPTMMVSTTAMNTA
LLQWHPPKELPGELLGYRLQYHRADEARPNTIDFGKDDQHFTVTGLHRGATYIFRLAAKN
RAGPGEEFEKEITTPEDAPSGFPQNLRVVGLTTSTTELTWEPPVLAERNGRITNYTVVYR
DINSQQELHNITADTHLTLSGLKPDTTYDVKVRARTSKGAGPLSPSIQSRTMPVEQVFAK
NFRVEAAMKTSVLLSWEVPDSYKSAVPFKILYNGQSVEVDGHSMRKLVADLQPNTEYSFV
LTNRGSSAGGLQHLVSIRTAPDLLPHKPLPASAYTADGRFTLSMPHVQDPSLVRWFYIMV
VPIDRVGGSVLAPRWSTPEELELDELLEAIEQGGGELRQRRQAERLKPYVAAQVDVLPET
FTLGDKKSYRGFYNRPLSPDLSYQCFVLASLKEPVDQKRYASSPYSDEIVVQVTPAQQQE
EPEMLWVTGPVLAVILIILIVIAILLFKRKRTHSPSSKDEQSIGLKDSLLAHSSDPVEMR
RLNYQTPGMRDHPPIPITDLADNIERLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKP
KNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRM
VWEQRTATVVMMTRLEEKSRVKCDQYWPPRGTETYGLIQVTLLDTVELATYTVRTFALHK
SGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC
FIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPA
RNLYAHIQKLGQVPPGESVTAMELEFKLLASSKAHTSRFISANLPCNKFKNRLVNIMPYE
LTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVM
LTRLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQ
FQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLE
RMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggcccctgagccagcctcagggaggacgatggtgcccctcgtgcccgcactcgtgatg
cttggtttggtggcgggtgcccatggcgacagcaaacctgtcttcattaaggtccctgag
gaccagactgggctgtcaggaggggtggcctccttcgtgtgccaagccacaggggaaccc
aagccgcgcatcacatggatgaagaaggggaagaaagtcagctcccagcgcttcgaggta
attgagtttgacgacggggcagggtccgtgctgcgaatccagccattgcgggtgcagcga
gatgaagccatctatgagtgcacggccaccaacagtctgggagagatcaacactagtgcc
aagctctcagtgctcgaagaggaacagctgccccccggcttcccctccattgacatgggg
cctcagctgaaggtggtggagaaggcccgcacggccaccatgctgtgcgcagcaggtggg
aatccagaccctgagatctcttggttcaaggacttcctccctgtggaccccgccgcgagc
aacggccgcatcaagcagctgcgttcaggtgccttgcagattgagagcagcgaggagtcg
gaccaaggcaagtacgagtgtgtggcgaccaactccgcaggcacacgctactcggctccc
gccaacctgtacgtgcgagatcagcgagaagtgcgccgcgtggctcctcgtttctccatc
cctcccagcagccaggaggtgatgccaggcggcagcgtgaacctgacgtgcgtcgccgtg
ggtgcacccatgccttatgtgaagtggatgatgggggccgaggagctcaccaaggaggat
gagatgccagtcggccgcaacgtgctggagctcagcaacgtggtgcgctccgccaactac
acctgcgtggccatctcctcgctgggcatgattgaggccacggcccaggtcaccgtgaaa
gctctgccgaagcctccgattgaccttgtggtgacagagacaactgccaccagtgtcacc
ctgacctgggactctgggaactcagagcccgtgtcctactacggcatccagtaccgtccg
gcgggtgcagagggccccttccaggaggtggacggcgtggccaccacccgctacagcatc
ggcggcctcagccccttctcggagtacgccttccgcgtgctggcggtgaacagcatcggg
cgcgggccccccagcgaggccgtgcgggcgcgcacgggggagcaggcgccctccagcccc
ccgcgccgcgtgcaggcgcgaatgctgagcgccagcaccatgctggtgcagtgggagccg
cctgaggagcccaacggcctggtgcggggctaccgtgtctactacacccccgactcccgc
cgccccctgagcgcctggcacaaacacaacacggacgccgggctcctcaccaccgtgggc
agcctgctgcccggcatcacctacagcctgcgcgtgctggccttcaccaccgtgggtgac
ggcccccccagccccaccatccaggtcaagacacagcagggagtgcccgcccagcccgcg
gacttccaggccgacgcggactccgacaccaggatccagctctcgtggctgctgcctccg
caggagcggatcatcaagtacgagctggtgtactgggcggcggaggacgcgggccagcag
cacaagttgaccttcgaccccacgtcctcctacactgtagaggacctgaagcccgacacc
ctgtaccgcttccagctggctgcccgctccgagatgggggtgggcgtcttcacccccacc
gttgaggctcgcacagcacaatccaccccctccgcccctccccagaaggtgacgtgcgtg
agcgtgggctccaccacggtccgggtaagttgggtcccaccgccagccgacagccgcaat
ggcgtcatcacccagtactcggtggcctacgaggcggtggacggcgaggaccgcgagcgg
cacgtggtgggcggcatcggccgcgagcactccagctgggacctggtgggcctggagaag
tggacggagtaccgggtgtgggtgcgggcgcacacggatgtgggccccggccccgagagc
agcccggtgctggtgcgcaccgacgaggacgtgcccagcgggccgccacggaaggtggag
gtggagccgctgaactccactgccgtgcgcgtctcctggaagctgcccgtccccagcaag
cagcacggtcagatccgcggctaccaggtcacctatgtgcggctagagaatggcgagccc
cgcggcccacccatcatccaggacgtcatgctggccgaggcccagtggcggccagaggag
tccgaggactatgaaaccaccatcagcggcctgaccccggagaccacctactccattacc
gtcgccgcctacaccaccaagggggacggtgcccgcagcaagcccaaaattgtcacgacc
acgggagcagtcccaggccggcccaccatgatggtcagcaccacggccatgaacaccgcg
ctgctccagtggcacccacccaaggagctgcctggggagctgctgggctaccggctgcag
taccaccgggccgacgaggcgcggcccaacaccatcgattttggcaaggacgaccagcac
tttacggtcactggcctgcacagaggggccacctacatcttccggcttgctgccaagaac
cgggccggcccaggcgaggagttcgagaaggagatcacgacccccgaggatgctcccagc
ggtttcccccaaaacctgcgcgtggtagggctgaccacatctaccacggaactgacctgg
gagcccccggtgctggcggagaggaacgggcgcatcaccaactataccgtggtgtaccgt
gacatcaacagccagcaggagctgcacaacatcactgccgacacccacctgacgctctcc
ggcctcaagccagacaccacttacgacgtcaaggtccgtgcacgcaccagcaaaggcgcc
ggcccgctcagccccagcatccagtcccggaccatgcccgtggagcaagtgtttgccaag
aacttccgtgtggaggctgcaatgaagacatctgtgctgctcagctgggaggtccctgac
tcctacaagtcagctgtacccttcaagattctgtacaacgggcagagcgtggaggtggat
gggcactcgatgcgcaagctggttgcagacctgcagccgaacacagagtactcgttcgtg
ctgacgaaccgtggcagcagtgcggggggcctgcagcacctcgtgtccattcgcacagcc
cccgacctcctgccgcacaagccgctgcctgcctctgcctacacagcggacggccgcttc
actctctccatgccccacgtgcaggacccctcgctcgtcaggtggttctacatcatggtg
gtgcccattgaccgtgtaggagggagtgtgctggcaccgcgatggagcacgcccgaggag
ctggagctggacgagcttctggaggccatcgagcagggcggtggggagctgcggcagcgg
cggcaggcagagcggctgaagccatacgtggccgctcaggtggacgtgctccctgagact
ttcaccctgggggacaagaagagctaccggggcttctacaaccggccgctgtctccagac
ctgagctaccagtgctttgtgcttgcctccctgaaggaacccgtggaccagaagcgctat
gcctccagcccctactccgacgagatcgtggtccaggtgacaccagcccagcagcaggag
gagcccgagatgctgtgggtgacgggccccgtcctggcagtcatcctcatcattctcatt
gtcatcgccattctcctgttcaagaggaaaaggacccactccccatcgtccaaggatgag
cagtcaattgggctgaaggactccttgctggcccactcctccgaccccgtggagatgcgg
cggctcaactaccagaccccaggtatgcgagaccacccgcccatccctatcaccgacctg
gcggacaacatcgagcgcctcaaagccaacgacggcctcaagttctcccaggaatacgag
tcaattgaccctggacagcagttcacgtgggagaattcaaacctggaggtgaacaagccc
aagaaccgctacgccaacgtcattgcctacgaccactctcgagtcatccttacctccatt
gatggtgtcccggggagtgactacatcaacgccaactacatcgatggctaccgcaagcag
aatgcctacattgccacgcagggcccgctgcctgagaccatgggcgatttctggaggatg
gtgtgggagcagcgtacagccactgtggtcatgatgacacggctggaggaaaagtcccgg
gtgaagtgcgatcagtactggccaccccgtggcaccgagacctacggcctcatccaggtg
accctgctggacacagtggagctggccacctacactgtgcgcacctttgcgctccacaag
agtggctccagtgagaagcgggagctgcgtcagttccagttcatggcctggccagaccac
ggagttcccgagtacccgacccccatcctggccttcctgcggcgggtcaaggcctgcaac
ccgctggacgccgggcccatggtggtgcactgcagtgcgggcgtgggccgcacgggctgc
ttcatcgtcatcgacgccatgctggagcggatgaagcatgagaagacggtggacatctac
ggccacgtgacgtgcatgcggtcacagcgcaactacatggtgcagaccgaggaccagtac
gtgttcatccatgaggccctgctggaggccgccacgtgtggacacacggaggtgcctgct
cgcaacctctatgcccacatccagaagctgggccaagtacctcctggggaaagtgtgacc
gccatggagctggagttcaagttgctggccagctccaaggcccacacatcccgcttcatc
agtgccaacctgccctgcaacaagttcaagaaccgcctggtgaacatcatgccctacgaa
ctgacccgtgtgtgtctgcaacccatccgcggcgtggagggctccgactacatcaacgcc
agcttcctggatggctatagacagcagaaggcctacatagccacacaggggcctctggcg
gagagcaccgaggacttctggcgcatgctgtgggagcacaactccaccatcatcgtcatg
cttaccaggcttcgggagatgggcagggagaagtgccaccagtactggcccgcagagcgc
tctgctcgctaccagtactttgtcgttgacccgatggctgagtacaacatgccccagtat
atcctgcgtgaattcaaggtcacagatgccagggatgggcagtcaaggacgatccggcag
ttccagttcacagactggccagagcagggcgtgcccaagacgggcgagggcttcatcgac
ttcatcgggcaggtgcacaagaccaaggagcagttcgggcaggatgggcccatcacggtg
cactgcagtgccggtgtcggccgcaccggggtgttcatcacgctgagcatcgtcctggag
cggatgcgctacgagggcgtggtcgacatgttccagaccgtgaagaccctgcgcacacag
cgcccagccatggtgcagacggaggaccagtaccagctgtgctaccgcgcggccctggag
tacctcggcagctttgaccactatgcaacgtaa
DBGET
integrated database retrieval system
