Phocoena sinus (vaquita): 116753428
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Entry
116753428 CDS
T07759
Symbol
PTPRC
Name
(RefSeq) receptor-type tyrosine-protein phosphatase C isoform X1
KO
K06478
receptor-type tyrosine-protein phosphatase C [EC:
3.1.3.48
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04514
Cell adhesion molecules
psiu04660
T cell receptor signaling pathway
psiu04666
Fc gamma R-mediated phagocytosis
psiu05132
Salmonella infection
psiu05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116753428 (PTPRC)
09150 Organismal Systems
09151 Immune system
04660 T cell receptor signaling pathway
116753428 (PTPRC)
04666 Fc gamma R-mediated phagocytosis
116753428 (PTPRC)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116753428 (PTPRC)
09163 Immune disease
05340 Primary immunodeficiency
116753428 (PTPRC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psiu01009
]
116753428 (PTPRC)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
psiu04090
]
116753428 (PTPRC)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
116753428 (PTPRC)
Protein phosphatases and associated proteins [BR:
psiu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
116753428 (PTPRC)
CD molecules [BR:
psiu04090
]
Proteins
116753428 (PTPRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
PTP-SAK
PTP_N
Tc-R-P
Y_phosphatase3
DSPc
CD45
PTPlike_phytase
Y_phosphatase2
PTP-NADK
CssAB
SCIMP
Motif
Other DBs
NCBI-GeneID:
116753428
NCBI-ProteinID:
XP_032487076
LinkDB
All DBs
Position
1:182314022..182436877
Genome browser
AA seq
1258 aa
AA seq
DB search
MTMYLWLKLLAFGFAFLDTVVLVTGQGAFTSTQGMNTTEEPSTLPAGDPLPAHTTAFSLA
SISERGNDSSETTPPPSPESTTTETSLNSWDNDSSLAVTGAPGERTAPSTLPADTSFSPV
TTLSPAHSSPAASPPHISNSTTQDNASDVFNASTTPSSPTPAKDIISTTDLTTTDPTTTH
KPSCEDRYAGISVHYVYSKENETYNAILSEVNSRYEKQLRGLQECEKKNINITLPSCYSP
FEYLLEVPPDHKHFQLNECVEPEKANTSLCLCWEISKNFTCDKKKITYKFECDGLSPYNE
SGRFEKFNLQPQSNYTCSSEVSYNNKILTSRNTTIKTDFRVPGIPQNMTCSNFSADKGWV
TWEPPEHFFHTFTLCYRNLSGERCHTLNKTTNTINLEYLKPFTKYEITLHASVNGRVKRN
GTDVKCVAETTATYPSKVKELHVSRKTDNSMNVSCKPPDDFNGPKTGKYHLIVSIGNNSA
GKELQQQKCTFSVEGLQYSTEYTFQVYYHNGKYPGHRITVSRSTSYNSNAVIIFLVFLII
VTSIALLVVLYKIYDLQKKRSSNLDEQQELVERDDEKQLMNVEPIHADVLLETYKRKIAD
EGRLFLAEFQSIPRVFGKFSIKDARKPFNQNKNRYVDILPYDYNRVELSDINGEAGSNYI
NASYIDGFKEPRKYIAAQGPRDETVDDFWRMIWEQKATVIVMVTRCEEGNKNKCALYWPL
MEEGSRVFGDVIVEINEHKRCPDYIIQKLTIANRKEKATGRAVTHIQFTSWPDHGVPEDP
HLLLKLRRRVNAFSNFFSGPVVVHCSAGVGRTGTYIGIDAMLEGLEAESKVDVYGYVVKL
RRQRCLMVQVEAQYILIHQALVEYNQFGETEVSLSELHSYLSNMKKRDPPSEPSPLEAEF
QRLPSYRSWRTQHIGNQEENKSKNRNSNVIPYDFNRVTLKHELEMSKESEHDSDESSDDD
SDSEEMGKYINASFVMSYWKPEVMIAAQGPLKETIGDFWQMIFQRKVKVIVMLTELKNGD
QEACSQYWEEGKQTYGDVEVHMKDTNKSSAYTIRAFELRHSKRKDPRTVFQYQFNNWNGE
ELPVEPKELILMIQNLKQKLPKKNSTEGNKFHRNVPLLIHCRDGSQQTGIFCALLNLLES
AETEEVIDVFQAVKSLRKARPGMVPTFEQYQFLYDIIASICPAQNGQVKKNNQQEDKIEF
DNEVDKAKQDANCVSPPGALDKTPEGNKEDESSKPTSGPEGPEHSANGPASPVLTQSA
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgtatttgtggcttaaactcttggcatttggctttgcctttctggacactgta
gtgttggttacaggacaaggcgcctttacttccactcaaggaatgaacacaacagaagag
ccctctactctgcctgcaggtgatcccttacctgctcacaccactgcattctcactcgca
agcatctctgaacgaggaaatgactcctcagagaccacgcctcctcctagcccagaaagt
accaccacggaaacatccctgaactcttgggataatgatagttctcttgctgtgacaggg
gctccaggagagaggactgcaccgagcaccttgcctgcagacacatctttctcaccagta
accactctcagccctgcacacagcagtcccgctgcctcacctccacacatctccaactcg
accacccaagacaatgcctcagatgtgttcaatgcgtccactacaccatcctctccgacc
cctgcaaaagacattatctctacaactgatctcacaacaacagatcctactactacacat
aagccatcatgtgaagacagatatgcaggtatctctgtgcactacgtttatagcaaggaa
aatgaaacgtataatgcaatacttagtgaagtgaacagtaggtatgaaaagcagctccgt
ggcctacaggaatgtgaaaagaagaatatcaatataacacttccttcatgttactctcca
tttgaatatttattagaggtaccaccagatcataaacattttcagctgaatgagtgtgta
gaacctgaaaaggcaaatacttctctttgtttatgttgggaaatcagtaaaaattttact
tgtgataaaaagaaaataacatataaatttgaatgtgatggcttatctccatataatgaa
agtggaagatttgaaaagttcaaccttcagccccaaagtaattatacttgtagttcagaa
gtatcttataacaacaagattcttactagccgaaatacaactattaaaacagattttaga
gttccaggaatccctcagaatatgacgtgttctaacttcagtgcagataaaggatgggtt
acctgggaaccaccggaacatttttttcatacgttcactctttgttatcggaatctttca
ggagaaagatgccacactctgaataaaaccacaaatacaattaatttggaatatttgaaa
ccttttacaaagtatgagataacattacatgcctctgtcaatggaagagtgaaacgtaat
ggaactgatgtgaaatgtgtagctgaaacgacagcaacatatccaagcaaggtcaaggag
ttacatgtttcaaggaagacagataatagtatgaatgtgagctgtaaacctcctgacgac
tttaatggccccaagacagggaagtaccatttgatagtcagtattggaaataactcggct
ggaaaagaattacaacaacaaaagtgcacattctcggtagaaggtcttcaatattcaaca
gaatatacatttcaggtttattatcacaatgggaaatatcctggtcatcgaataactgtt
tcacgatcaacatcttataattctaatgcagtgatcatatttctggtatttctgattatt
gtgacatcaatagccctgcttgttgttctctataaaatctatgatctgcaaaagaaaaga
tccagcaatttagatgaacagcaggaacttgttgaaagggatgatgagaaacaactgatg
aacgtggagcccatccatgcagatgttttgttggaaacttacaaaagaaagatcgctgat
gaagggaggctcttcctggctgaattccagagcattccgagggtatttggcaagttttct
atcaaggatgctcgaaaaccctttaaccagaataaaaaccgctacgttgacatccttcct
tatgattataaccgtgttgaactctctgacataaatggagaggcagggtccaactatatc
aatgccagctatattgatggtttcaaagaacccaggaaatacattgctgcacaaggtccc
agggatgaaactgttgatgatttctggaggatgatctgggaacagaaagccacggttatt
gtcatggtcactcgatgtgaagaagggaacaagaacaagtgtgcattatactggccattg
atggaagagggcagccgggtttttggagatgtgattgtagagatcaatgagcacaaaaga
tgcccggattacatcattcagaagttgaccattgcaaatagaaaagaaaaagcaactggg
agagcagtgacccacattcagttcaccagctggccagaccatggggtccccgaagaccct
cacctgctcctcaagctgcgcaggagagtgaatgctttcagcaacttcttcagtggccct
gtcgtggtgcactgcagtgctggtgttggacgcacaggcacctatattggaattgatgcc
atgttagaaggcctggaggcagagagcaaggtggatgtctatggctatgtcgtcaagcta
aggcgacagaggtgcctgatggttcaggtggaggcacagtacatcttgatccatcaggcc
ttggtggaatacaatcagtttggggaaacagaagtgagcttgtctgagttacattcatat
ctgtctaacatgaagaaaagagatccacccagtgagccttccccactggaggctgaattc
cagagacttccttcatataggagctggaggacacagcacattgggaatcaagaagaaaat
aagagtaaaaacaggaattctaacgtcattccatatgactttaacagagtgacacttaaa
catgaactggagatgagcaaggagagtgagcacgactcagatgagtcctctgacgatgac
agtgactcggaagagatgggcaaatacatcaatgcctcctttgtaatgagttattggaaa
cctgaagtgatgattgcagctcagggaccactgaaagagaccattggtgacttttggcaa
atgatattccaaagaaaagtcaaggtgattgttatgctgacagagctaaagaatggagac
caggaagcctgttctcagtactgggaggaaggaaagcaaacatatggagacgtagaagtt
catatgaaggacaccaataaatcttcagcctataccatccgtgcatttgaactgagacat
tccaagaggaaagatccacgaactgtgttccagtaccaattcaataactggaatggggaa
gagctgcccgtggagcccaaagaattaatcttaatgattcagaatctcaaacagaaactt
cccaagaagaattccactgaagggaataagtttcacaggaatgtgcctctcctcattcac
tgcagagatggatctcagcaaacaggaatattttgtgctttgttaaatctcttggaaagt
gcagaaacagaagaagtgatagatgtttttcaagcagtaaaatctctacgcaaagctagg
ccgggaatggttcccacatttgagcaatatcaattcctgtatgacatcattgctagcatc
tgccctgcccagaatgggcaggtgaagaaaaacaaccaacaagaagataaaattgaattt
gataatgaagtggacaaagcgaagcaggatgctaactgtgtgagtccacctggtgccctg
gataagactcctgaaggaaataaagaggatgaaagttctaaacccacaagtggccctgag
gggccagaacattctgccaatggtccagcgagtccagttttaactcaaagtgcatag
DBGET
integrated database retrieval system
