Phocoena sinus (vaquita): 116754235
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Entry
116754235 CDS
T07759
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04360
Axon guidance
psiu05017
Spinocerebellar ataxia
psiu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116754235 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
116754235 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
116754235 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116754235 (TRPC3)
Ion channels [BR:
psiu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116754235 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
Ank_5
PBC
Motif
Other DBs
NCBI-GeneID:
116754235
NCBI-ProteinID:
XP_032488563
Ensembl:
ENSPSNG00000004096
UniProt:
A0A8C9BG89
LinkDB
All DBs
Position
5:19747225..19824561
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AA seq
920 aa
AA seq
DB search
MSTKVSKCKEQARVTFPAPEEEEEGEDEGAETQRRRRGWRGVNGGLEPRLAPLQREPHDY
CLPPFPPGPDMSMEESPSLRRKTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERFLDAAE
YGNIPVVRKMLEESRTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALLL
AISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILAA
HCQKYEVVHMLLMKGARIERPHDYFCKCGDCTEKQRHDSFSHSRSRINAYKGLASPAYLS
LSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILN
GDLESAEPLEMHRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTVAI
KCLVVLVVALGLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLCLLVFNASDRF
EGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQL
WNVLDFGMLSIFIAAFTARFLAFLQATKAQHYVDSYVQESDLSEVTLPPEIQYFTYARDK
WLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVF
LAFMIGMFILYSYYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGY
VLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFS
LVPSPKSFVYFIMRIINFSRCRRRRLQKDIEMGMGNSKSRLNLFTQSNSRVFESHSFNSI
LNPPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEE
LAILIHKLSEKLNPSVLRCE
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaggtcagcaagtgcaaggagcaagcgagggtgaccttccccgcgccggag
gaggaggaggagggcgaggacgaaggcgcggagacgcagcgccgccgacggggctggagg
ggcgtcaacggggggctcgaaccgcgcttggcgcccttgcagcgggaaccgcacgactac
tgcctgccgcccttcccgccggggcccgacatgtcaatggaggaaagcccttccctgagg
cgcaagacagtgatgcgcgagaagggccggcgccaggctgtccggggcccggccttcatg
ttcaacgatcggggcaccagcctcaccgccgaggaggagcgcttcctcgacgccgccgag
tacggcaacatccctgtggtgcgcaagatgctggaggagtccaggacgctgaacgtcaac
tgcgtggactacatgggccagaacgcgctgcagctggcggtgggcaatgagcacctggag
gtgactgagctgctgctcaagaaggagaacctggcgcgcatcggcgacgccctgctgctc
gccatcagcaagggctacgtgcgcatcgtggaggccatcctcaaccacccgggtttcgcg
gccagcaagcgcctcaccctgagcccctgtgagcaggagctgcaggacgacgacttctac
gcctacgacgaggacggcacgcgcttctcccccgacatcacccccatcatcctggcggcg
cactgccagaagtacgaggtggtgcacatgctgctgatgaagggcgccaggatcgagcgg
ccgcacgactatttctgcaagtgcggggactgcacggagaagcagaggcacgactccttc
agccactcgcgctcgaggatcaatgcctacaaagggctggccagcccagcgtatctgtcc
ttgtccagcgaggaccccgtgctcaccgccctggagctcagcaacgagctggccaagctg
gccaacatagagaaggagttcaagaatgactatcgcaagctctccatgcaatgcaaagac
ttcgtagtgggtgtgctggatctttgccgagactcggaagaggtagaagccattctgaat
ggagatctggaatcggcagagcctctggagatgcacaggcataaagcttcactgagtcgt
gtcaaacttgccattaagtatgaagtcaaaaagtttgtggctcaccccaactgccagcag
cagctcttgacaatctggtacgagaacctctcaggcctgcgggaacagacggtagctatc
aagtgtctggtggttctggtcgtggccttgggccttccgttccttgccatcggctactgg
attgcaccttgcagcaggctggggaaaattctgcgaagcccttttatgaagtttgtggca
cacgctgcttctttcatcatcttcctgtgcctgcttgtgttcaatgcctcagacagattc
gaaggaatcaccacgttgccaaatatcactgttattgactatcccaaacagatcttcagg
gtgaaaaccacccagttcacatggactgaaatgctaattatggtctgggttcttggaatg
atgtggtctgagtgtaaggagctctggctggaaggacccagggaatacattttgcagttg
tggaatgtcctagactttgggatgctctccatcttcattgctgctttcacagccagattc
ctggctttccttcaggcaacaaaagcacaacactatgtggacagttatgtccaagagagc
gacctcagtgaagttacacttccaccagagatacagtatttcacttatgccagagataaa
tggctcccttctgaccctcagatcatatctgaaggtctctatgccatagccgtcgtgctc
agcttttctcggatcgcctacatcctccctgcgaatgagagcttcggccccttacagatc
tctcttggaaggactgtgaaggacatatttaagttcatggtcctctttattatggtgttt
cttgcttttatgattggcatgttcatactttattcttactaccttggggctaaagtaaat
gctgcttttaccactgtagaagaaagtttcaagactttgttttggtcgatatttggattg
tctgaagtgacttccgttgtgctcaaatatgatcacaaattcatagagaatattggctac
gttctttatggaatatacaatgtaactatggtggttgttttactcaacatgctcattgct
atgattaatagctcatatcaagaaattgaggatgacagtgacgtagaatggaagtttgct
cgctcaaaactttggttatcatattttgatgatggaaaaacattacctccacccttcagt
ctggttcctagtccaaagtcatttgtttatttcatcatgcggatcattaacttttccaga
tgcagaaggagaaggctacagaaggatatagaaatgggaatgggtaactcaaagtccagg
ttaaacctcttcactcagtctaactcaagagtttttgaatcacacagttttaacagcatt
ctcaatccgccaacacgttatcagcagataatgaaaagacttataaagcggtatgttttg
aaagcacaagtagacaaagaaaatgatgaagttaatgaaggtgaattaaaagaaatcaag
caagatatctccagccttcgctatgaacttttggaggacaagagccaagcaactgaggaa
ttagccattctaattcataaactcagtgagaaactgaatcccagcgtgctgagatgtgaa
tga
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