KEGG   Phocoena sinus (vaquita): 116755576
Entry
116755576         CDS       T07759                                 
Symbol
ERCC6L2
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
psiu  Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116755576 (ERCC6L2)
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    116755576 (ERCC6L2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 ERCC3_RAD25_C VIGSSK SWI2_SNF2
Other DBs
NCBI-GeneID: 116755576
NCBI-ProteinID: XP_032491112
Ensembl: ENSPSNG00000002842
LinkDB
Position
6:87691257..87840264
AA seq 1623 aa
MKLRDTCNYRGFLCYRFPRGKTAGRSLRPCQPRFCSREIPKTVREAVLAGFSESGLEVVV
DPRAKPITEREVRGSTCLLVVLPRRRSPRRLDIWHPGERCLAPSPDNEKLCEASIKSITV
DENGKSFAVILYSDFQERKVPLKRLQEVKSVKDCSRNFIFDDEDLEKPYFPDRKFPSSAV
AFQLSENGDSIPYTINRYLRDYQREGALFLYEHFIQGRGCILGDDMGLGKTVQVISFLAA
VLGKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWRDELDTWGYFRV
TTLHGNKKDSELTRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARV
TEIMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKEFSDQVEHGQRHT
ATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVL
ETEDVSLILQSSEPCTCSSGRKRRNCCYKTNSHGETVRTLYFSYLAVLQKVANHVALLQA
ASTSKQQETLIKKICDQVFSRFPDFVQKSKDAAFETLSDPKYSGKMKVLQQLLNRCRQNK
DKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGNTKSEERIKIVKEFNSTQDVNICLVSTM
AGGLGLNFVGANVVILFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLR
QVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVYNLFKLRSQGSCLTRDILEREGQ
VEAGIMTATTWLKEEPPVHKLETDREPDCQEHKGPEQPAEPLAKEACDLCSDFSEDESVG
NSIIKTAKNKASDSSKASGSPGQLTLLQCGFSKLFETKCEAVEDSDGNITSDDESSDEQP
TCLSTEAKDVGCRKSQDSLGTSKHQKFTNILNPNGKYIFDKTEILEQNISSECDDEKNFK
NTVGHHCISQNVTESEDSDIILPTQYTTQRFLKRRVRFKPPVDGSEDSETENPVNIRNNG
DNRKTSVRGNGLISKQLNPENKTLKSNTKRKGSSDISDESDDIEISSKSRVRKKRATSSL
RFKRKEENKRELYTFPKTMKKTNQLCATDEDCTSQAIDDFTSSDDDLSVSHISVSKQSHR
PKTIKDRISFSSKLPSHEKNSTFIPRKPMKFPNKSIVNQDQMCESMDKFLGGVQEVAYIH
SNQNVIGSSKAENHMSRWAARDVFELKQFSQLPANIAVCTSKTYKEKMKGDTSTHTKECQ
QPSEGSISFPLYISHPVSQKKKNVYRTGQTTFIIGETPKGIRRKQFEEMASYFKLSSVKE
FAKHITNATSEERQKMLRDFYASHYPEVKEFFVDSPSEFIKSAHEEGERVRNLSEKRESL
IKERVSDSVTLSFKNCTKKFSQICSPKIYKEKSTKFQNHSFHREEVLSNDVETKKLPVSS
TQETNSGKNSQASKDTVASCFLNSKSGAYELENTMKNRQDLTGLGASRNGPFFKVENKKI
ENPVLENTSVVSLLGDTSILDDLFKSHGNSPTRLPKNVLSGPVEKAKQRPKDFWDILNEQ
NDESLSKLTDLAVIETLCEKVPSAASSKRKEDLEAPLWKSNEKFLWKKFNSSDTDESTTN
TQE
NT seq 4872 nt   +upstreamnt  +downstreamnt
atgaaacttcgcgatacttgcaactatcgcggttttttgtgttaccggtttcctagagga
aagacggccggaagatcgctccgcccatgtcaaccaagattttgttctcgtgagatcccg
aaaacagttcgggaggcagttctcgcgggattttccgagtcagggctggaagttgtggtg
gatcccagagcgaagcctattactgagagggaggttagggggtcgacctgcctgcttgtt
gtcctcccccggcggcggagccccagacgattagatatatggcatccaggagaaagatgt
ctcgccccttctccagataatgaaaaactttgtgaagcaagcataaaatctatcacagtg
gatgaaaatgggaagtcatttgcagtcatcttatattcagattttcaagaaaggaaagta
cctcttaaaaggcttcaagaagtgaaatctgttaaagattgctccaggaattttatattt
gatgatgaagatttggaaaaaccttattttccagacagaaaatttccatcatctgctgtt
gcttttcaattatctgaaaatggagactctattccttatactattaataggtatttgaga
gactaccaaagggaaggagccctgtttctctatgaacacttcatccaaggaagagggtgt
attcttggtgatgacatgggacttggaaaaacagtacaggttatttcatttttggctgca
gttttgggtaaaaagggaactcgtgaagatattgaaaataatatgccagagtttttacta
agaagtatgaaaaaggaacccctttcttctacagcaaaaaagatgttcttaatagttgct
cctctttctgtcctctacaactggagggatgaactggacacctggggatatttcagagtc
actactttacatggtaacaaaaaagacagtgaactgactcgtgtgaaacagaggaaatgt
gaaattgctctaacaacatatgaaacactgcgcttatgtctggatgaacttaacagtttg
gaatggtcagctgtcattgtagatgaagctcatagaatcaagaatccaaaggctagagta
actgaaattatgaaagctttaaaatgtaatgtccgaattggcctcactggaaccattctt
cagaacaacatgaaagaattgtggtgtgttatggactgggctgtgccaggacttttaggt
agcaggatccacttcaagaaggagttttctgaccaagtagaacatggtcagagacacaca
gcaacaaaaagagaactagctactggccgaaaggccatgcaaaggcttgcaaaaaagatg
tctggatggtttctcaggcgtaccaagactctaatcaaggatcagttgcctaagaaggaa
gaccggatggtatattgttctctgacagattttcagaaagccgtctatcaaacagtatta
gaaacagaagatgtgtctttgatacttcaatcttctgagccttgtacctgcagcagtggc
cgaaaaaggagaaattgttgttataagaccaattcacatggcgaaacagtgagaaccttg
tatttcagttaccttgcagtccttcagaaggtagctaaccatgttgcattactgcaggct
gctagcacctccaaacaacaggaaacacttatcaagaagatatgtgatcaagtattttcc
agattcccagattttgtgcagaaaagcaaagatgcagcctttgaaacactttctgaccca
aaatacagtggaaaaatgaaggtccttcagcagcttttaaaccgttgtaggcaaaacaaa
gataaagttcttcttttctccttttccaccaagttgctcgatgtgctgcagcaatactgt
atggcatctgggcttgattaccgacgacttgatggaaatacaaaatcagaggaaagaatc
aagattgtgaaagagttcaacagtacacaagatgttaacatttgccttgtctccacaatg
gctggtggactaggcctcaattttgttggtgccaatgtggtgatattatttgatcctaca
tggaatccagccaatgatcttcaagcaattgacagagcatataggattgggcaatgcaga
gatgtcaaagtgcttaggctgatatccttgggaactgtggaggagatcatgtacttacga
caggtatacaagcagcaacttcactgtgtggtggttggaagtgaaaatgccaagcggtat
tttgaagcagttcaaggatcaaaagagcatcgaggagagctttttggagtctataatctc
ttcaaactgagatcccaagggtcttgtcttacaagggacatcctggagagagaaggccaa
gtggaagcagggatcatgacagctacaacatggttgaaagaggaacctccagtacacaaa
ctagaaacagatagggagcctgactgtcaagaacacaaaggtccagaacagcctgcagaa
ccactagcaaaagaagcatgtgatctctgcagtgattttagtgaagatgaatcagtagga
aactcaataataaagactgctaaaaacaaagcatctgactcaagtaaagcttcaggttct
cctgggcagcttaccttactccagtgtggtttctctaaattgtttgagacaaaatgtgaa
gcagttgaggatagtgatggaaatattacctctgacgatgaaagttctgatgaacagccc
acatgcctttcaacagaagccaaagatgttggttgtcggaaaagtcaagactctcttggt
acttcaaagcatcagaaattcactaacatcctaaatccaaatggaaaatatatttttgat
aaaactgagattttagaacagaatatttcttctgagtgtgatgatgagaaaaattttaaa
aatacagttggccaccattgcatttcacagaatgtcacagaatcagaagatagtgatatc
atcttacccacacagtacacaactcaaagattcctcaagaggagggtaaggtttaagcca
cctgtggatggatctgaagattctgaaacagaaaaccctgtaaatataagaaataatggt
gataatagaaagaccagtgtcagaggaaatggactaatttcaaaacaattaaatcctgag
aacaagaccctaaaatctaatacaaaaagaaaaggcagtagtgatattagtgacgaatct
gatgacattgaaatttcctccaagtcaagagtaagaaagaaaagagctactagttctctg
aggtttaagagaaaagaggaaaataaaagggaactttacacttttccaaaaacaatgaaa
aaaacaaaccaactgtgtgcaacagatgaagactgtacctctcaggctattgatgatttt
acatcttcagatgatgatttatctgttagccacatcagtgtctctaaacagagccataga
ccaaaaactataaaagatagaatcagtttctcttcaaaattacctagccatgagaaaaat
agcactttcataccaagaaaaccgatgaaatttccaaataagagcattgtcaatcaagat
cagatgtgtgaatcaatggataaatttttaggtggtgttcaggaagtggcttacattcat
tcaaaccagaatgtgattggatcaagcaaagctgaaaatcacatgagccgatgggcagca
cgtgatgtatttgaattgaagcagttttcccagcttcctgctaacatagctgtttgtact
tctaagacatacaaggaaaaaatgaagggagatacatcgacacatacaaaggaatgccaa
caaccaagtgaaggcagcatttcctttcccctttacatttcacaccctgtaagccagaag
aagaaaaatgtctaccgaacaggccagaccaccttcataattggagaaacaccaaaaggg
atccgcagaaaacaatttgaagaaatggcttcttattttaagttgtcttctgtaaaggaa
tttgctaaacatataactaatgccacatcagaagaacgacagaaaatgctaagagacttc
tacgcttctcactatccagaggtaaaagaattttttgtggattccccttcagaattcatt
aaatctgcccatgaggaaggagagagagtcaggaatctgtctgaaaaaagagagtctctt
ataaaagaaagggtgtcagattctgtaactttgtcatttaaaaattgtaccaaaaaattt
tctcaaatttgcagcccaaaaatatataaagaaaaatcgactaagtttcaaaatcacagt
ttccatagagaagaggtgctttctaatgatgtggaaactaagaaattacctgtaagctct
acccaagagacgaacagtgggaaaaacagccaagcatccaaagatactgtagcatcctgt
ttcctgaacagtaagtctggagcgtatgagttggaaaataccatgaaaaaccgacaggat
ctcacaggattgggtgcttcaagaaatggaccctttttcaaagtggaaaacaaaaagata
gaaaatccagtgttagaaaacacttctgtggtaagcttacttggtgacacctctattctt
gatgacctctttaaaagtcacgggaacagtcccacacgactgccaaagaacgttctttca
gggcccgtggagaaagcaaaacagagaccaaaagatttctgggacatcttgaatgaacag
aatgacgagagtcttagtaaactcaccgacttggcagtaatagagactctgtgtgaaaaa
gtgccttctgctgcatcctccaaaaggaaagaggatcttgaagctcctctttggaaatca
aatgagaaatttttgtggaaaaaatttaactccagtgatacagatgaaagcacaactaat
acccaagagtaa

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