Phocoena sinus (vaquita): 116755638
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Entry
116755638 CDS
T07759
Symbol
TJP2
Name
(RefSeq) tight junction protein ZO-2 isoform X1
KO
K06098
tight junction protein 2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116755638 (TJP2)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Guanylate_kin
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
116755638
NCBI-ProteinID:
XP_032491278
Ensembl:
ENSPSNG00000014370
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Position
6:complement(50574476..50712539)
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AA seq
1183 aa
AA seq
DB search
MPVRGDRGFPPRREMSGWLQAPGMEELIWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENG
ETSIVISDVLPGGPADGLLQENDRVVMVNGTPMEGVLHSFAVQQLRKSGKIAAIVVKRPR
KVQLAPPQGSPPVHEHDRAFELMDEFDGRSARSGYSERSRPSSRGECSRSWEDSLERGRP
HDRARSRERDRSRGRSLERGLDHDPDDYYYQRARERSRGRSLERGLDHDDDDYRRARERS
RGRSFDPTYDRAYSPEREYGRRAQADARYGASWSRSREHLHSRSPSPEPRVQLDSDRPIG
ILLMKSKANEEYGLRLGSQIFIKEMTGTGLASKDGNLHEGDIILKINGTVTENMSLTDAR
KLIEKSRGKLQLVVLRDSKQTLINIPSLNDSDSEIEDISEIESNQSFSPEDRRQQYSDYD
YHSSNEKLKERPNSREDTHSRWSRMGATPTPFKSTGDVAAAVSAEPSKEPTYQEESPVPP
PKPAPRTVLRPSPEDLAIYGPNTKMVRFKKGDSVGLRLAGGNDVGIFVAGIQEGTSAEQE
GLQEGDQILKVNTQDFRGLVREDAVLYLLEIPKGEMVTILAQSRADVYRDILACGRGDSF
FIRSHFECEKETPQSLAFTRGEVFRVVDTLYDGKLGHWLAVRIGNELEKGLIPNRSRAEQ
MASVQTAQRDSSGDRADFWRMRGQRSGVKKNLRKSREDLTAVVSVSTKFPAYERVLLREA
GFKRPVVLFGPIADIALEKLANELPDLFQTAKTEPRDAGSEKSSGVVRLNTVRQIIEQEK
HALLDVTPKAVDLLNYTQWFPIVIFFNPDSRQGVKTMRQRLNPSSNKSSRKLFDQANKLK
KTCAHLFTATINLNSANDSWFGSLKDTIQHQQGEAVWVSEGKMEGMDDDPEDRMSYLTAM
GADYLSCDSRLISDFEDTDGEGGAYTDNELDEPAEEPLVSSITRSSEPVQHEESIRKPSP
EPGAQMRRAASRDQLRDNSPPPAFKPEPPQAKTQNKEESFDFSRSYEYKSNPSAVAGNEI
PGTSTKGCPPPIAAKPAFGRPILKPSTPVPPPESEEVGESSEEQDSAPKSVLGKVKIFEK
MDHKARLQRMQELQEAQNARIEIAQKHPDIYAVPMKTPKPEPGPPQYTSSRPPEPQKGPA
RLYQDPRGSYGSDAEEEEYRQQLSEHSKRNYYGQPSRYRDTEL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcgaggagatcgcgggtttccaccccggcgggagatgtcaggttggctccaa
gccccaggcatggaggagttgatatgggaacagtacactgtgaccctacagaaggattcc
aagagaggatttggaattgcagtgtccggaggcagagacaacccacactttgaaaatggg
gagacatcaatcgtcatttctgacgtgctcccgggtgggcccgccgatggactgcttcaa
gaaaatgacagggtggtcatggttaacggcacccccatggaaggcgtgctccattcattt
gctgttcagcagctgaggaaaagtgggaagattgctgccattgtggtcaagaggccccgg
aaggtccagctggccccgccgcagggcagccctcccgtccacgagcatgaccgggctttc
gagctgatggatgaatttgatggcagaagcgcgcgcagcgggtacagcgagaggagccgg
cccagcagccgcggagagtgcagccgcagctgggaggacagcctggagaggggtcgtccc
cacgaccgggcgcgcagccgggagcgagaccggagccgcggccggagcctggagcggggc
ctggaccacgaccccgacgactactactaccagcgagcccgagagcgcagccgtggccgc
agcctcgagcggggcctggaccacgacgacgatgactaccggcgagcccgggagaggagc
cgcggccggagctttgacccgacctacgatcgcgcctacagcccggagcgggagtatggc
cgcagggcccaggcggatgcccggtacggggcgtcctggagccgcagccgcgagcacctc
cactcccgcagccccagccccgagccgcgggtacagctggactcagacaggcccatcggg
atccttctgatgaaaagcaaagcaaatgaagagtatggtctccggctcggcagtcagatc
ttcataaaggaaatgaccggaacaggtctagcatctaaagatggcaacctgcatgaagga
gacataattctcaagataaatggaaccgtaactgagaacatgtctttaacggatgctcga
aaactgatagaaaagtcaagaggaaaactccagctcgtggtgttgagggacagcaagcag
acgctcatcaacatcccctcgttaaatgacagcgactcagaaatagaagatatctcagaa
atagagtcaaaccaatcattttctccggaggacagacgacagcagtattccgattatgat
tatcattcctcgaatgaaaagctgaaggaaagaccaaattcaagagaggacacacatagc
agatggtccaggatgggcgccacacccactccctttaagtccactggggatgttgcagct
gcagtgagcgcagagcccagcaaggaacccacataccaagaggaatccccagttcctcca
ccaaaaccagccccaagaactgttcttcgtccgagtcctgaagatttagcaatatatggc
cccaataccaaaatggtgaggttcaagaagggagacagtgtgggcctccggttggccggt
ggcaatgatgtcgggatatttgtggccggcattcaagagggtacctcagcggagcaagaa
ggtcttcaagaaggggaccagattctgaaggtgaacacacaggatttcagagggctcgtt
cgggaggatgccgttctctacctgttagaaatccccaaaggcgaaatggtgaccatttta
gcccagagccgagctgatgtgtatagagacatactggcttgtggcagaggggattcgttt
tttataagaagccactttgaatgtgagaaagaaactccacagagcctggctttcaccaga
ggggaggtcttccgtgtggtagatacgctgtacgatgggaaactgggccactggctggcc
gtgaggattggaaatgaattggagaaaggcttaatccccaacagaagcagagcagaacag
atggccagcgttcagactgcccagagagacagcagtggggacagggcagacttctggagg
atgcgcggccagaggtcgggcgtgaagaagaacctacggaagagtcgggaagacctgacg
gccgttgtgtcagtcagcaccaagttcccggcttacgagagggttttgcttcgagaagct
ggtttcaagagacctgtggtcttatttggccccatagcagatatagccctggagaagttg
gcaaatgagttgcctgacctattccaaactgctaaaacggaaccaagagacgcgggatct
gagaaatcctccggggtggtgcggttaaataccgtgaggcaaattattgaacaggaaaag
catgcgctcctggatgtgactcctaaagccgtggacctgttgaattatactcagtggttc
ccgattgtgatttttttcaacccagactctagacaaggtgtcaaaaccatgagacagagg
ttgaatccgtcatccaacaaaagttctcggaagttattcgaccaagccaacaagcttaaa
aaaacttgtgcacatcttttcacagctacaatcaacctaaattcagccaacgatagctgg
tttggcagcctgaaggacacgattcagcatcagcaaggagaagcagtttgggtctccgaa
ggaaagatggaagggatggatgatgaccccgaagaccgcatgtcctacttaaccgccatg
ggcgcggactatctgagttgcgacagccgtctcatcagtgactttgaagacaccgacggc
gaaggaggcgcctacactgacaatgagctggatgagccagctgaggagccgctggtgtct
tccatcacccgctcctcggagccggtgcagcacgaggagagcataaggaaacctagccca
gagccaggagctcagatgaggagggctgctagcagagatcaacttagggacaatagcccg
cccccggcgttcaagccagagccgccccaggccaaaacccaaaacaaagaagaatccttt
gacttctctagatcctatgaatacaagtcaaacccctcagctgttgccggtaatgaaatt
cccgggacatctaccaaaggatgtccacctcctattgcagcaaaacccgcctttggacgg
cctatactgaagccgtccactcccgtccctcccccagagagtgaggaggtgggagaaagc
agtgaggagcaggacagcgcccccaagtctgtcctgggcaaagtaaaaatatttgagaag
atggatcacaaggcgagattacagagaatgcaagagctccaagaagcacagaatgcaagg
attgaaattgctcagaagcatcctgatatctatgcagttccaatgaaaacacccaagccg
gagcccggcccaccgcagtacacaagttccaggccccccgagccacagaaaggtcctgcc
agactttatcaggatcccagaggaagttatggcagtgacgccgaggaggaagaataccga
cagcagctgtcggaacactcaaaacgcaattattacggccagccttcccgataccgggac
acggaattatag
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