KEGG   Phocoena sinus (vaquita): 116757109
Entry
116757109         CDS       T07759                                 
Symbol
CXCR4
Name
(RefSeq) C-X-C chemokine receptor type 4
  KO
K04189  C-X-C chemokine receptor type 4
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03250  Viral life cycle - HIV-1
psiu03260  Virion - Human immunodeficiency virus
psiu04020  Calcium signaling pathway
psiu04060  Cytokine-cytokine receptor interaction
psiu04061  Viral protein interaction with cytokine and cytokine receptor
psiu04062  Chemokine signaling pathway
psiu04144  Endocytosis
psiu04360  Axon guidance
psiu04670  Leukocyte transendothelial migration
psiu04672  Intestinal immune network for IgA production
psiu04810  Regulation of actin cytoskeleton
psiu05163  Human cytomegalovirus infection
psiu05170  Human immunodeficiency virus 1 infection
psiu05200  Pathways in cancer
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116757109 (CXCR4)
   03260 Virion - Human immunodeficiency virus
    116757109 (CXCR4)
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    116757109 (CXCR4)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    116757109 (CXCR4)
   04061 Viral protein interaction with cytokine and cytokine receptor
    116757109 (CXCR4)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    116757109 (CXCR4)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    116757109 (CXCR4)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    116757109 (CXCR4)
   04672 Intestinal immune network for IgA production
    116757109 (CXCR4)
   04062 Chemokine signaling pathway
    116757109 (CXCR4)
  09158 Development and regeneration
   04360 Axon guidance
    116757109 (CXCR4)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    116757109 (CXCR4)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    116757109 (CXCR4)
   05163 Human cytomegalovirus infection
    116757109 (CXCR4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:psiu04030]
    116757109 (CXCR4)
   04050 Cytokine receptors [BR:psiu04050]
    116757109 (CXCR4)
   04090 CD molecules [BR:psiu04090]
    116757109 (CXCR4)
G protein-coupled receptors [BR:psiu04030]
 Rhodopsin family
  Chemokine
   CXC Chemokine
    116757109 (CXCR4)
Cytokine receptors [BR:psiu04050]
 Chemokine receptors
  CXC Chemokine
   116757109 (CXCR4)
CD molecules [BR:psiu04090]
 Proteins
  116757109 (CXCR4)
SSDB
Motif
Pfam: 7tm_1 CXCR4_N 7TM_GPCR_Srsx MITRAC7_Phoenixin
Other DBs
NCBI-GeneID: 116757109
NCBI-ProteinID: XP_032494345
Ensembl: ENSPSNG00000015228
UniProt: A0A8C9C6P9
LinkDB
Position
7:94530332..94534089
AA seq 353 aa
MDGFHIFSSDNYTEDDLGSGDYDSIKEPCFREENAHFNRIFLPTVYSIIFLTGIVGNGLV
ILVMGYQKKLRSMTDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVN
LYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVKE
GDGRYICDRFYPNDLWLVVFQFQHIVVGLILPGIVILSCYCIIISKLSHSKGYQKRKALK
TTVILILAFFACWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLNP
ILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggacgggttccatatattctcttcagataattacacagaggatgacttgggctcagga
gactatgactccataaaggaaccctgcttccgggaggaaaatgcccatttcaaccgtatc
tttctgcccactgtctactccatcatcttcttgactggcatagtgggtaacggattggtc
atcctggtcatgggttaccagaagaaactgagaagcatgacagacaagtacagactgcac
ctgtctgtggcagacctcctctttgttctcacacttcccttctgggcagttgatgccgtg
gcaaactggtactttgggaagttcctgtgcaaggcagtccatgtcatctacacagtcaac
ctctacagcagtgtcctcatcctggccttcatcagtctggaccggtacctggctatcgtc
cacgccaccaacagtcagaggccaaggaagctgttggctgaaaaggtggtctatgttggt
gtctggatacctgctctcctgttgactattcccgatttcatctttgccaacgtcaaggag
ggggatgggaggtacatctgcgaccgcttctatcccaacgacttgtggttggtggtgttc
cagtttcagcacatcgtggttggccttatcctgccgggtatcgtcatcctgtcctgctat
tgcattatcatctccaagctgtcccactccaagggctaccagaagcgaaaggccctcaag
accacagttatcctcatcctggctttctttgcctgctggctgccttactacattgggatc
agcatcgactccttcatcctcctggaaatcatccagcaagggtgtgagtttgagagcact
gtgcacaagtggatttccatcaccgaggccctagcctttttccattgttgcctgaatccc
atcctctatgccttccttggggccaaatttaaaacctctgcccagcatgcactcacctct
gtgagcagagggtccagcctgaagattctctccaagggaaagcggggtggacattcttct
gtttcaactgagtcagagtcttcgagttttcactccagctaa

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