Phocoena sinus (vaquita): 116757109
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Entry
116757109 CDS
T07759
Symbol
CXCR4
Name
(RefSeq) C-X-C chemokine receptor type 4
KO
K04189
C-X-C chemokine receptor type 4
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03250
Viral life cycle - HIV-1
psiu03260
Virion - Human immunodeficiency virus
psiu04020
Calcium signaling pathway
psiu04060
Cytokine-cytokine receptor interaction
psiu04061
Viral protein interaction with cytokine and cytokine receptor
psiu04062
Chemokine signaling pathway
psiu04144
Endocytosis
psiu04360
Axon guidance
psiu04670
Leukocyte transendothelial migration
psiu04672
Intestinal immune network for IgA production
psiu04810
Regulation of actin cytoskeleton
psiu05163
Human cytomegalovirus infection
psiu05170
Human immunodeficiency virus 1 infection
psiu05200
Pathways in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116757109 (CXCR4)
03260 Virion - Human immunodeficiency virus
116757109 (CXCR4)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116757109 (CXCR4)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116757109 (CXCR4)
04061 Viral protein interaction with cytokine and cytokine receptor
116757109 (CXCR4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116757109 (CXCR4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116757109 (CXCR4)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
116757109 (CXCR4)
04672 Intestinal immune network for IgA production
116757109 (CXCR4)
04062 Chemokine signaling pathway
116757109 (CXCR4)
09158 Development and regeneration
04360 Axon guidance
116757109 (CXCR4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116757109 (CXCR4)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
116757109 (CXCR4)
05163 Human cytomegalovirus infection
116757109 (CXCR4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
psiu04030
]
116757109 (CXCR4)
04050 Cytokine receptors [BR:
psiu04050
]
116757109 (CXCR4)
04090 CD molecules [BR:
psiu04090
]
116757109 (CXCR4)
G protein-coupled receptors [BR:
psiu04030
]
Rhodopsin family
Chemokine
CXC Chemokine
116757109 (CXCR4)
Cytokine receptors [BR:
psiu04050
]
Chemokine receptors
CXC Chemokine
116757109 (CXCR4)
CD molecules [BR:
psiu04090
]
Proteins
116757109 (CXCR4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
CXCR4_N
7TM_GPCR_Srsx
MITRAC7_Phoenixin
Motif
Other DBs
NCBI-GeneID:
116757109
NCBI-ProteinID:
XP_032494345
Ensembl:
ENSPSNG00000015228
UniProt:
A0A8C9C6P9
LinkDB
All DBs
Position
7:94530332..94534089
Genome browser
AA seq
353 aa
AA seq
DB search
MDGFHIFSSDNYTEDDLGSGDYDSIKEPCFREENAHFNRIFLPTVYSIIFLTGIVGNGLV
ILVMGYQKKLRSMTDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVN
LYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVKE
GDGRYICDRFYPNDLWLVVFQFQHIVVGLILPGIVILSCYCIIISKLSHSKGYQKRKALK
TTVILILAFFACWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLNP
ILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacgggttccatatattctcttcagataattacacagaggatgacttgggctcagga
gactatgactccataaaggaaccctgcttccgggaggaaaatgcccatttcaaccgtatc
tttctgcccactgtctactccatcatcttcttgactggcatagtgggtaacggattggtc
atcctggtcatgggttaccagaagaaactgagaagcatgacagacaagtacagactgcac
ctgtctgtggcagacctcctctttgttctcacacttcccttctgggcagttgatgccgtg
gcaaactggtactttgggaagttcctgtgcaaggcagtccatgtcatctacacagtcaac
ctctacagcagtgtcctcatcctggccttcatcagtctggaccggtacctggctatcgtc
cacgccaccaacagtcagaggccaaggaagctgttggctgaaaaggtggtctatgttggt
gtctggatacctgctctcctgttgactattcccgatttcatctttgccaacgtcaaggag
ggggatgggaggtacatctgcgaccgcttctatcccaacgacttgtggttggtggtgttc
cagtttcagcacatcgtggttggccttatcctgccgggtatcgtcatcctgtcctgctat
tgcattatcatctccaagctgtcccactccaagggctaccagaagcgaaaggccctcaag
accacagttatcctcatcctggctttctttgcctgctggctgccttactacattgggatc
agcatcgactccttcatcctcctggaaatcatccagcaagggtgtgagtttgagagcact
gtgcacaagtggatttccatcaccgaggccctagcctttttccattgttgcctgaatccc
atcctctatgccttccttggggccaaatttaaaacctctgcccagcatgcactcacctct
gtgagcagagggtccagcctgaagattctctccaagggaaagcggggtggacattcttct
gtttcaactgagtcagagtcttcgagttttcactccagctaa
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