KEGG   Phocoena sinus (vaquita): 116757116
Entry
116757116         CDS       T07759                                 
Symbol
CD28
Name
(RefSeq) T-cell-specific surface glycoprotein CD28
  KO
K06470  CD28 antigen
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04514  Cell adhesion molecules
psiu04660  T cell receptor signaling pathway
psiu04672  Intestinal immune network for IgA production
psiu04940  Type I diabetes mellitus
psiu05162  Measles
psiu05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
psiu05320  Autoimmune thyroid disease
psiu05322  Systemic lupus erythematosus
psiu05323  Rheumatoid arthritis
psiu05330  Allograft rejection
psiu05332  Graft-versus-host disease
psiu05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    116757116 (CD28)
 09150 Organismal Systems
  09151 Immune system
   04660 T cell receptor signaling pathway
    116757116 (CD28)
   04672 Intestinal immune network for IgA production
    116757116 (CD28)
 09160 Human Diseases
  09161 Cancer: overview
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    116757116 (CD28)
  09172 Infectious disease: viral
   05162 Measles
    116757116 (CD28)
  09163 Immune disease
   05322 Systemic lupus erythematosus
    116757116 (CD28)
   05323 Rheumatoid arthritis
    116757116 (CD28)
   05320 Autoimmune thyroid disease
    116757116 (CD28)
   05330 Allograft rejection
    116757116 (CD28)
   05332 Graft-versus-host disease
    116757116 (CD28)
  09166 Cardiovascular disease
   05416 Viral myocarditis
    116757116 (CD28)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    116757116 (CD28)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:psiu04090]
    116757116 (CD28)
CD molecules [BR:psiu04090]
 Proteins
  116757116 (CD28)
SSDB
Motif
Pfam: V-set_2 V-set CASP_dom
Other DBs
NCBI-GeneID: 116757116
NCBI-ProteinID: XP_032494366
LinkDB
Position
7:complement(32393974..32423175)
AA seq 265 aa
MCPERSKSVVVAADDESGCSGASPAHLTLGLLREEGRKPWPTVSTMILSLLLALNFFPSI
QVAENKILVNQSPMLVVNNNEVNLSCKYTYNLFSKEFRASLYKGVDSAVEVCAVNGNHSK
SLQSTNKEFNCTVNLGNETVTFYLQDLYVNQTDIYFCKIEVLYPPPYIDNEKSNGTIIHV
KEKHLCPAPRSPESSKPFWALVVVNGVLAFYSLLATVALSNCWMKSKRNRMLQSDYMNMT
PRRPGPTRKHYQPYAPARDFAAYRS
NT seq 798 nt   +upstreamnt  +downstreamnt
atgtgccctgagagaagtaagtcggtggtggtggctgcggatgacgagtcaggttgctca
ggtgcgtctccagctcacctcacacttgggcttctcagggaggaggggcggaagccctgg
cccaccgttagcacgatgatcctcagcctgctcctggctctcaacttcttcccctcaatt
caagtagcagaaaacaagattttggtgaatcagtcgcccatgcttgtggtaaacaacaat
gaggtcaacctcagctgcaagtatacctacaacctcttctcgaaggagttccgggcatcc
ctttataagggagtagatagtgctgtggaggtctgtgctgtgaatggaaatcactccaag
tcacttcagtctacaaataaggaattcaactgcactgtgaacttgggcaacgaaacagtg
acattctacctccaggatttgtacgttaaccaaacggatatttatttctgcaaaatcgag
gttctgtatcctcctccttacatagacaatgagaagagtaatgggaccattatccatgtg
aaagagaaacatctttgtccagctccccggtctcctgagtcctctaagccattttgggca
cttgtggtggtaaatggagtcctagctttctatagcttgctagcaacagtggctctttct
aactgctggatgaagagtaagagaaacaggatgcttcagagcgactacatgaacatgaca
cctcgcaggccggggcccacccgaaagcactaccagccctatgcgccagcacgggacttt
gcagcctaccgttcctga

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