Phocoena sinus (vaquita): 116758539 Help Entry 116758539         CDS       T07759                                  Symbol CASP1 Name (RefSeq) caspase-1 isoform X1   KO K01370   caspase 1 [EC:3.4.22.36] Organism psiu  Phocoena sinus (vaquita) Pathway psiu04148   Efferocytosis psiu04217   Necroptosis psiu04613   Neutrophil extracellular trap formation psiu04621   NOD-like receptor signaling pathway psiu04623   Cytosolic DNA-sensing pathway psiu04625   C-type lectin receptor signaling pathway psiu05014   Amyotrophic lateral sclerosis psiu05132   Salmonella infection psiu05133   Pertussis psiu05134   Legionellosis psiu05135   Yersinia infection psiu05164   Influenza A psiu05171   Coronavirus disease - COVID-19 psiu05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:psiu00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     116758539 (CASP1)   09143 Cell growth and death    04217 Necroptosis     116758539 (CASP1)  09150 Organismal Systems   09151 Immune system    04613 Neutrophil extracellular trap formation     116758539 (CASP1)    04621 NOD-like receptor signaling pathway     116758539 (CASP1)    04623 Cytosolic DNA-sensing pathway     116758539 (CASP1)    04625 C-type lectin receptor signaling pathway     116758539 (CASP1)  09160 Human Diseases   09172 Infectious disease: viral    05171 Coronavirus disease - COVID-19     116758539 (CASP1)    05164 Influenza A     116758539 (CASP1)   09171 Infectious disease: bacterial    05132 Salmonella infection     116758539 (CASP1)    05135 Yersinia infection     116758539 (CASP1)    05133 Pertussis     116758539 (CASP1)    05134 Legionellosis     116758539 (CASP1)   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     116758539 (CASP1)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     116758539 (CASP1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:psiu01002]     116758539 (CASP1)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:psiu04131]     116758539 (CASP1) Enzymes [BR:psiu01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.36  caspase-1      116758539 (CASP1) Peptidases and inhibitors [BR:psiu01002]  Cysteine peptidases   Family C14: caspase family    116758539 (CASP1) Membrane trafficking [BR:psiu04131]  Autophagy   Other autophagy associated proteins    TRIM-directed selective autophagy     116758539 (CASP1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C14 CARD Motif Other DBs NCBI-GeneID:  116758539 NCBI-ProteinID:  XP_032497319 Ensembl:  ENSPSNG00000010097 LinkDB All DBs Position 8:27852538..27863785 Genome browser AA seq 404 aa AA seqDB search MADKVLKEKRKLFVHSVGMGTINGLLDELLEKRVLNQGEMEKVRDENATVMDKARALIDS VIRKGPQACQICISHIREDDSLLAGTLGLSSGSQSGNYLNTQESQVVVPPFPAPQAMQDN PVKLASSGPGRNLKLCPLETAQRIWKEKSAEIYPIMERSIRTRIALIICNTEFENLPRRD GADVDIRNMKMLLEGLGYSVDVKENLTASDMTIELKAFAARPEHRTSDSTFLVLMSHGIR TGVCGKKYSEEVQDVLKVNTIFQILNTWNCPSLKDKPKVIIIQACRGENQGVVWLKDSVE ASGNCSLLSPEDFEDDAIKKAHVEKDFIAFCSSTPDNVSWRHPVLGSLFIIKLIEHLQEY AWFCDLEEIFRKVRFSFELPDGRAQMPTAERVTLTRCFYLFPGY NT seq 1215 nt NT seq  +upstreamnt  +downstreamnt atggccgacaaggtcctgaaggagaagagaaagctgtttgtccattcagtgggcatgggt acaataaatggcttgttggatgaactattagagaaaagagtgctgaaccagggggagatg gagaaagtaagagatgaaaatgctacagttatggataaggcccgagctttgatagactct gttattcggaaagggccccaggcatgccaaatttgcatcagtcatattcgtgaagatgac tccctccttgcaggaacactggggctctcctcaggttcacaatctggaaattatcttaat acacaagaatcccaagtggtggttcctcctttcccagctcctcaggcaatgcaggacaac ccagttaagcttgcatcttcaggaccaggaaggaacctcaagctttgccccctagaaaca gcccaaaggatatggaaagaaaagtcagcagagatttacccaataatggaaaggtcaatc cgcacacgtattgccctcattatctgcaacacagagtttgaaaatcttcccaggagagat ggagctgatgttgatatcagaaacatgaagatgctgctagaaggtctggggtacagtgtg gatgtgaaagaaaatctcaccgcttcggatatgactatagagctgaaggcatttgctgct cgcccagagcacaggacctctgatagtacttttctggttctcatgtctcatggaatccgg actggcgtttgtgggaagaaatactctgaagaagtccaagatgtattaaaagtcaacacc atctttcaaattttgaacacctggaattgtccaagtttgaaagacaaacccaaggtgatc attatccaggcctgccgtggtgagaatcaaggggtggtatggctaaaagattcagtagaa gcttctggaaactgttccttattgtctccagaagattttgaggatgatgccattaagaaa gcccacgtagagaaggattttattgctttctgctcttcaacaccagataatgtttcttgg cgacatcctgtattgggttctctttttattattaaactcattgaacatttgcaagaatat gcctggttttgtgacctggaagaaattttccgaaaggttcgattttcatttgagctgcca gatggtagggcacagatgcccacggctgaaagagtgactttgacaagatgtttctacctc tttccaggatattaa

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