Phocoena sinus (vaquita): 116758540
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Entry
116758540 CDS
T07759
Symbol
SMPD1
Name
(RefSeq) sphingomyelin phosphodiesterase isoform X1
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00600
Sphingolipid metabolism
psiu01100
Metabolic pathways
psiu04071
Sphingolipid signaling pathway
psiu04142
Lysosome
psiu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
116758540 (SMPD1)
09130 Environmental Information Processing
09132 Signal transduction
04071 Sphingolipid signaling pathway
116758540 (SMPD1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116758540 (SMPD1)
09143 Cell growth and death
04217 Necroptosis
116758540 (SMPD1)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
116758540 (SMPD1)
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GFIT
Motif
Pfam:
Metallophos
Spp-24
Motif
Other DBs
NCBI-GeneID:
116758540
NCBI-ProteinID:
XP_032497321
Ensembl:
ENSPSNG00000009506
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Position
8:61454043..61458666
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AA seq
526 aa
AA seq
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MPRHGVSSGQGRPRSGREQTLDRSLGAASLRLLWMGLALALALSDSQVLWAPAGAHPLPA
QGLTAKFIRLAPQLREGFSWWNLTCPACKGLFTAIDISLRNEASVAQVGSVAIKMCTLLK
IAPPAVCQSAVQLFQDDVVEVWTRSVLSPSEACGLLLGSSCGHWDIFSSWNISLPAVPKP
LPQPPEPPAPGSPVSRVLFLTDLHWDQSYLEGTDPNCENPLCCRQDSGPPPASRPGAGYW
GEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHNIWQQSRQDQLRALTTITDLVK
KFLGPVPVYPAVGNHESTPVNGFPPPFIEGNQSSHWLYEAMAKAWEPWLPAEALRTLRIG
GFYALSPRPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIG
HIPPGHCLKSWSWNYYRIVERYENTLAGQFFGHTHVDEFEIFYDEETLSRPLSVAFLAPS
ATTYISLNPALPPCRVPCLPNRWQLLRELSPGPGPRDLHPEPDAGE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccacggagtgtcttccggccagggccgccccaggtcgggccgggagcagacc
ctggacaggtccttgggggccgccagcctgaggctcctgtggatgggcttggcgctggcg
ctggccctgtccgactcccaggttctctgggcccctgccggggcccaccctcttcccgcc
caaggccttaccgccaagttcattcgcctagcgccccagctccgggaaggctttagctgg
tggaaccttacctgccccgcctgcaaaggactgttcaccgccatcgacatcagtctgcgg
aacgaggccagcgtggcccaggtgggctccgtggccatcaagatgtgcacgctgctgaaa
atagcaccgccggccgtgtgccagtcagccgtccagctctttcaggacgacgtggtggag
gtgtggacgcgctcggtgctgagcccgtctgaggcctgtggtctgctccttggctcctcc
tgtggacactgggacatcttctcatcttggaacatctctttgccggctgtgccaaagcca
ttgccccagccgcccgagcccccggccccaggctcccctgtcagccgcgtcctcttcctc
actgacctgcactgggatcaaagctacctggagggcacagaccccaactgtgagaacccc
ctgtgctgccgccaggattctggcccgccgcctgcctcccggccaggtgctggatactgg
ggcgagtacagcaagtgtgacctgcccctgcggaccctggagagcctgttgagtggcctg
ggccccgccggcccttttgatatggtgtactggacgggcgatatccctgcccacaacatc
tggcagcagtctcgtcaggaccagctgcgggccctgaccaccatcacagacctcgtgaag
aagttcttggggccagtgcctgtgtaccctgctgtgggcaaccacgagagcacacccgtc
aatggcttccctccccccttcatagagggcaaccagtcttcgcactggctctacgaggcg
atggccaaggcctgggagccctggctgcctgctgaagcccttcgcaccctcagaattggg
gggttctatgcactttccccacgccccggcctccgcctcatctctctcaatatgaatttt
tgttcccgtgagaacttctggctcttgatcaactccacagatcctgctggacagctccag
tggctggtgggggagcttcaggccgctgaggaccgaggagacaaagtgcatataattggc
cacattcccccagggcactgcctgaagagctggagctggaattattaccgaattgtggag
aggtacgagaacaccttggctggtcagttctttggccacacccacgtggatgagtttgag
atcttctatgatgaggagaccctaagccggccgctatcggttgccttcctggcgcccagt
gccaccacctacatcagcctcaatcctgccctccctccttgcagggtaccgtgtctacca
aatagatggcaactactccgggagctctcacctggtcctggaccacgagacctacatcct
gaacctgacgcaggcgaatga
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