Phocoena sinus (vaquita): 116760240
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Entry
116760240 CDS
T07759
Symbol
VDR
Name
(RefSeq) vitamin D3 receptor isoform X1
KO
K08539
vitamin D3 receptor
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04928
Parathyroid hormone synthesis, secretion and action
psiu04961
Endocrine and other factor-regulated calcium reabsorption
psiu04978
Mineral absorption
psiu05152
Tuberculosis
psiu05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
116760240 (VDR)
09154 Digestive system
04978 Mineral absorption
116760240 (VDR)
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
116760240 (VDR)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
116760240 (VDR)
09171 Infectious disease: bacterial
05152 Tuberculosis
116760240 (VDR)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psiu01009
]
116760240 (VDR)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116760240 (VDR)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
psiu03310
]
116760240 (VDR)
Protein phosphatases and associated proteins [BR:
psiu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116760240 (VDR)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116760240 (VDR)
Nuclear receptors [BR:
psiu03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
116760240 (VDR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116760240
NCBI-ProteinID:
XP_032500701
Ensembl:
ENSPSNG00000015833
LinkDB
All DBs
Position
10:65408133..65464651
Genome browser
AA seq
440 aa
AA seq
DB search
MPRPGPQGAIQHGMEAMAAGASLPDPGDFDRHVPRICGVCGDRATGFHFNAMTCEGCKGF
FRRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMV
LKRKEEEALKDSLRPKLSDEQQRIIAILLDAHHKTYDPTYADFSQFRPPVREGENEGNHP
SGPWFIHTPSCSGNSSSACSDRYTSSPDTMEPTGFSNLDLSEEDSDDSSVTLDLSQLSML
PHLADLVSYSIQKVIGFAKMIPGFRDLTPEDQIVLLKSSAIEVIMLRSNQSFTMDDMSWT
CGSPDYKYQVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQ
DAALVEAIQERLSNTLQTYIRCCHPPPGSHLLHAKMIQKLADLRSLSEEHSKQYRCLSFQ
PECSRKLTPLVLEVFGSEIS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggccaggaccccagggggccatccagcatgggatggaggcgatggcagccggc
gcttccttacctgaccccggtgacttcgaccggcacgtgccccggatctgcggtgtgtgc
ggagaccgagccaccggcttccatttcaacgctatgacctgcgaaggctgcaaaggcttc
ttcagacggagcatgaagcggaaggcactgttcacctgtcccttcaatggagactgccgc
atcaccaaggacaaccgccgccactgccaggcctgccggctcaagcgctgtgtggacatc
ggcatgatgaaggagttcatcctgactgatgaagaggtgcagcggaagcgggagatggtc
ctcaagaggaaggaggaggaggccttgaaggacagcctgcggccgaagctgtccgacgag
cagcaacgcatcatcgccatcctgctggacgcccaccacaagacctatgaccccacctac
gccgacttcagccagttccggcctccggttcgagagggtgagaatgaagggaaccatccc
tcagggccttggttcatacacacgcccagctgctctggaaactcatcctccgcctgctca
gatcgctacacctcctctccagatacgatggagccaaccggcttctccaacctggatctg
agtgaagaagactctgatgactcttctgtgaccctggacctgtcccagctctccatgctg
ccgcacctggctgacctggtcagttacagtatccagaaggtcattggctttgccaagatg
atcccagggttcagagacctcacccccgaggaccagatcgtgctgctgaagtcgagtgcc
attgaggtcatcatgctgcgttccaaccagtctttcaccatggacgacatgtcctggacc
tgtggcagcccggactacaagtaccaagtcagtgatgtaaccaaagctggacacagcctg
gagctgatcgagcccctcatcaagttccaggtggggctgaagaagctgaacttgcatgag
gaggaacacgtgctgctcatggccatctgcattgtctccccagaccgtcccggggtacag
gacgctgcgctggtcgaggccatccaggagcgcctgtccaacacgctgcagacctacatc
cgctgctgccacccacccccaggcagccacctgctccacgccaagatgatccagaagcta
gcggacctgcgcagcctgagcgaggaacactccaagcagtatcgctgcctctccttccag
cccgagtgcagcaggaagctcacgcccctcgtgctcgaggtgtttggcagcgagatctcc
tga
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